Microscopy Image Browser: A Platform for Segmentation and Analysis of Multidimensional Datasets (Q27345307)

1

0 references

Helena Vihinen

object named as

Helena Vihinen

4

0 references

Eija Jokitalo

object named as

Eija Jokitalo

5

0 references

author name string

Darshan Kumar

Creative Commons Attribution 4.0 International

3

0 references

language of work or name

English

0 references

publication date

January 2016

0 references

published in

PLOS Biology

0 references

volume

14

0 references

issue

1

0 references

page(s)

e1002340

0 references

copyright license

start time

4 January 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

How to bury the dead: elimination of apoptotic hair cells from the hearing organ of the mouse

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

A high-level 3D visualization API for Java and ImageJ

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

NIH Image to ImageJ: 25 years of image analysis

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

Fiji: an open-source platform for biological-image analysis

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

Computer visualization of three-dimensional image data using IMOD

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

OMERO: flexible, model-driven data management for experimental biology

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

3D Slicer as an image computing platform for the Quantitative Imaging Network

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

Metadata matters: access to image data in the real world

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

Efficient semi-automatic 3D segmentation for neuron tracing in electron microscopy images

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

A workflow for the automatic segmentation of organelles in electron microscopy image stacks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

Plant development. Arabidopsis NAC45/86 direct sieve element morphogenesis culminating in enucleation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

ER sheet persistence is coupled to myosin 1c-regulated dynamic actin filament arrays

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

Machine learning in cell biology - teaching computers to recognize phenotypes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

Cdc42-dependent structural development of auditory supporting cells is required for wound healing at adulthood

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

Advances in high-resolution imaging--techniques for three-dimensional imaging of cellular structures

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

Progressive sheet-to-tubule transformation is a general mechanism for endoplasmic reticulum partitioning in dividing mammalian cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

Power Watershed: A Unifying Graph-Based Optimization Framework

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699692

BioImageXD: an open, general-purpose and high-throughput image-processing platform.

29 September 2017

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1002340

CHOLINE TRANSPORTER-LIKE1 is required for sieve plate development to mediate long-distance cell-to-cell communication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1002340

Rhinomonas nottbecki n. sp. (cryptomonadales) and molecular phylogeny of the family Pyrenomonadaceae

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1002340

Scale-space and edge detection using anisotropic diffusion

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1002340

SLIC superpixels compared to state-of-the-art superpixel methods.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1002340

Connectomic reconstruction of the inner plexiform layer in the mouse retina

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1002340

Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1002340

Supervoxel-based segmentation of mitochondria in em image stacks with learned shape features.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1002340

An experimental comparison of min-cut/max-flow algorithms for energy minimization in vision.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1002340

The molecular architecture of axonemes revealed by cryoelectron tomography.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1002340

Optimized anisotropic rotational invariant diffusion scheme on cone-beam CT

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26727152

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PBIO.1002340

1 reference

2588289

2588289

1 reference

0 references

1 reference

1 reference