Next generation multilocus sequence typing (NGMLST) and the analytical software program MLSTEZ enable efficient, cost-effective, high-throughput, multilocus sequencing typing (Q27311311)

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English	Next generation multilocus sequence typing (NGMLST) and the analytical software program MLSTEZ enable efficient, cost-effective, high-throughput, multilocus sequencing typing	scientific article

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scholarly article

1 reference

Europe PubMed Central

25 June 2017

Next generation multilocus sequence typing (NGMLST) and the analytical software program MLSTEZ enable efficient, cost-effective, high-throughput, multilocus sequencing typing (English)

1 reference

Europe PubMed Central

25 June 2017

0 references

1

object named as

Yuan Chen

1 reference

Europe PubMed Central

25 June 2017

9

object named as

John R Perfect

1 reference

Europe PubMed Central

25 June 2017

Anastasia P Litvintseva

3

object named as

Anastasia P Litvintseva

1 reference

Europe PubMed Central

25 June 2017

author name string

Aubrey E Frazzitta

2

1 reference

Europe PubMed Central

25 June 2017

Charles Fang

4

1 reference

Europe PubMed Central

25 June 2017

Thomas G Mitchell

5

1 reference

Europe PubMed Central

25 June 2017

Deborah J Springer

6

1 reference

Europe PubMed Central

25 June 2017

Yun Ding

7

1 reference

Europe PubMed Central

25 June 2017

George Yuan

8

1 reference

Europe PubMed Central

25 June 2017

language of work or name

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publication date

24 January 2015

1 reference

Europe PubMed Central

25 June 2017

Fungal Genetics and Biology

1 reference

Europe PubMed Central

25 June 2017

75

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Europe PubMed Central

25 June 2017

64-71

1 reference

Europe PubMed Central

25 June 2017

A Benchmark Study on Error Assessment and Quality Control of CCS Reads Derived from the PacBio RS

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

21 March 2017

Aneuploidy and drug resistance in pathogenic fungi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

21 March 2017

A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

21 March 2017

Spread of Cryptococcus gattii in British Columbia, Canada, and detection in the Pacific Northwest, USA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

21 March 2017

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

21 March 2017

Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

21 March 2017

AFLP: a new technique for DNA fingerprinting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

21 March 2017

Hybrid error correction and de novo assembly of single-molecule sequencing reads

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

21 March 2017

Real-time DNA sequencing from single polymerase molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

21 March 2017

Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

21 March 2017

Acquisition of aneuploidy provides increased fitness during the evolution of antifungal drug resistance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

21 March 2017

Estimation of the current global burden of cryptococcal meningitis among persons living with HIV/AIDS

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

7 April 2017

Pacific biosciences sequencing technology for genotyping and variation discovery in human data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

9 May 2017

Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

The Cryptococcus neoformans transcriptome at the site of human meningitis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

High-throughput multilocus sequence typing: bringing molecular typing to the next level

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

Gene conversion occurs within the mating-type locus of Cryptococcus neoformans during sexual reproduction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

Population genetic analyses reveal the African origin and strain variation of Cryptococcus neoformans var. grubii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

Evidence that the human pathogenic fungus Cryptococcus neoformans var. grubii may have evolved in Africa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

Low diversity Cryptococcus neoformans variety grubii multilocus sequence types from Thailand are consistent with an ancestral African origin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

What can be learned from genotyping of fungi?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

A flexible and efficient template format for circular consensus sequencing and SNP detection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

Consensus multi-locus sequence typing scheme for Cryptococcus neoformans and Cryptococcus gattii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

Bacterial strain typing in the genomic era.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

Molecular evidence that the range of the Vancouver Island outbreak of Cryptococcus gattii infection has expanded into the Pacific Northwest in the United States

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

Multilocus sequence typing reveals three genetic subpopulations of Cryptococcus neoformans var. grubii (serotype A), including a unique population in Botswana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

Multilocus sequence typing for differentiation of strains of Candida tropicalis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

Fungal multilocus sequence typing--it's not just for bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

Multispecies outbreak of cryptococcosis on southern Vancouver Island, British Columbia.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 September 2017

Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

31 May 2018

Multilocus sequence typing of the pathogenic fungus Aspergillus fumigatus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

31 May 2018

Multilocus sequence typing of Scedosporium apiospermum and Pseudallescheria boydii isolates from cystic fibrosis patients.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 November 2018

Ceratonia siliqua (carob) trees as natural habitat and source of infection by Cryptococcus gattii in the Mediterranean environment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 November 2018

Database-driven multi locus sequence typing (MLST) of bacterial pathogens.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374426

28 November 2018

Divergence, hybridization, and recombination in the mitochondrial genome of the human pathogenic yeast Cryptococcus gattii

1 reference

https://pubmed.ncbi.nlm.nih.gov/25624069

12 December 2020

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Identifiers

10.1016/J.FGB.2015.01.005

1 reference

Europe PubMed Central

25 June 2017

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1 reference

Europe PubMed Central

25 June 2017

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Semantic Scholar paper ID

f2445a4f6fa4af18408d76c996f4db7dfd5af47b

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