LC-MS-based metabolomics (Q27015012)

Jun Feng Xiao

series ordinal

2

1 reference

Leepika Tuli

series ordinal

3

1 reference

Habtom W. Ressom

series ordinal

4

1 reference

language of work or name

1 reference

February 2012

1 reference

1 reference

8

1 reference

issue

2

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page(s)

470-81

1 reference

MSEA: a web-based tool to identify biologically meaningful patterns in quantitative metabolomic data

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

MetaboAnalyst: a web server for metabolomic data analysis and interpretation

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

HMDB: the Human Metabolome Database

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Processing methods for differential analysis of LC/MS profile data

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Proposed minimum reporting standards for chemical analysis

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

MassBank: a public repository for sharing mass spectral data for life sciences

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Proteomics by mass spectrometry: approaches, advances, and applications

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Metabolic profiling of the response to an oral glucose tolerance test detects subtle metabolic changes

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Highly sensitive feature detection for high resolution LC/MS

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

METLIN: a metabolite mass spectral database

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Metabolomics – the link between genotypes and phenotypes

7 April 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

7 April 2017

https://api.crossref.org/works/10.1039%2FC1MB05350G

'Metabonomics': understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Standard reporting requirements for biological samples in metabolomics experiments: microbial and in vitro biology experiments.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Quantification and deconvolution of asymmetric LC-MS peaks using the bi-Gaussian mixture model and statistical model selection

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Evaluation of Peak Picking Quality in LC−MS Metabolomics Data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Targeted metabolomics for biomarker discovery.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Dealing with the unknown: metabolomics and metabolite atlases

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

LC-high resolution MS in environmental analysis: from target screening to the identification of unknowns

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Proposal for field sampling of plants and processing in the lab for environmental metabolic fingerprinting

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

A statistically rigorous test for the identification of parent-fragment pairs in LC-MS datasets

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Effects of sample handling and storage on quantitative lipid analysis in human serum

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Ovarian cancer detection from metabolomic liquid chromatography/mass spectrometry data by support vector machines.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

From large analogical instruments to small digital black boxes: 40 years of progress in mass spectrometry and its role in proteomics. Part II 1985-2000.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Database resources in metabolomics: an overview

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

MetAlign: interface-driven, versatile metabolomics tool for hyphenated full-scan mass spectrometry data preprocessing

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Serum metabolomics reveals irreversible inhibition of fatty acid beta-oxidation through the suppression of PPARalpha activation as a contributing mechanism of acetaminophen-induced hepatotoxicity

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Urine metabolomics analysis for kidney cancer detection and biomarker discovery

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Increasing the mass accuracy of high-resolution LC-MS data using background ions: a case study on the LTQ-Orbitrap

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Towards a universal product ion mass spectral library - reproducibility of product ion spectra across eleven different mass spectrometers

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Feature detection and alignment of hyphenated chromatographic-mass spectrometric data. Extraction of pure ion chromatograms using Kalman tracking

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

OutlierD: an R package for outlier detection using quantile regression on mass spectrometry data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

UPLC-ESI-TOFMS-based metabolomics and gene expression dynamics inspector self-organizing metabolomic maps as tools for understanding the cellular response to ionizing radiation.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Automated sub-ppm mass accuracy on an ESI-TOF for use with drug discovery compound libraries

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Metabolomics as a complementary tool in cell culture

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Normalization method for metabolomics data using optimal selection of multiple internal standards

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Sample treatments prior to capillary electrophoresis-mass spectrometry

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Mass spectrometry-based metabolomics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Metabolomic database annotations via query of elemental compositions: mass accuracy is insufficient even at less than 1 ppm

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Second-order peak detection for multicomponent high-resolution LC/MS data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Large-scale human metabolomics studies: a strategy for data (pre-) processing and validation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Towards a full reference library of MS(n) spectra. Testing of a library containing 3126 MS2 spectra of 1743 compounds

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

HUPO Plasma Proteome Project specimen collection and handling: towards the standardization of parameters for plasma proteome samples

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Metabonomics in toxicology: a review

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Metabolomics by numbers: acquiring and understanding global metabolite data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Screening of biomarkers in rat urine using LC/electrospray ionization-MS and two-way data analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Statistical quality assessment and outlier detection for liquid chromatography-mass spectrometry experiments

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Analytical strategies for LC-MS-based targeted metabolomics

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Single and multiple ion recording techniques for the analysis of diphenylhydantoin and its major metabolite in plasma

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699692

Development and application of a differential method for reliable metabolome analysis in Escherichia coli.

31 May 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Acidic acetonitrile for cellular metabolome extraction from Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Quantitative evaluation of intracellular metabolite extraction techniques for yeast metabolomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Determination of serotonin and its precursors in human plasma by capillary electrophoresis-electrospray ionization-time-of-flight mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Optimization and evaluation of metabolite extraction protocols for untargeted metabolic profiling of liver samples by UPLC-MS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Normalization strategies for metabonomic analysis of urine samples.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Metabolomics identifies perturbations in human disorders of propionate metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Plant phenotype demarcation using nontargeted LC-MS and GC-MS metabolite profiling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Time-course metabolic profiling in Arabidopsis thaliana cell cultures after salt stress treatment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Plant breeding: importance of plant secondary metabolites for protection against pathogens and herbivores

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Balancing robust quantification and identification for iTRAQ: application of UHR-ToF MS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Probabilistic assignment of formulas to mass peaks in metabolomics experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Optimization of procedures for collecting and storing of CSF for studying the metabolome in ALS

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

Metabolite identification via the Madison Metabolomics Consortium Database

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05350G

High-Performance Isotope Labeling for Profiling Carboxylic Acid-Containing Metabolites in Biofluids by Mass Spectrometry

21 January 2018

1 reference

12 December 2020

Isocratic and gradient elution chromatography: a comparison in terms of speed, retention reproducibility and quantitation

1 reference

12 December 2020

13C isotope-labeled metabolomes allowing for improved compound annotation and relative quantification in liquid chromatography-mass spectrometry-based metabolomic research

1 reference

12 December 2020

Recent developments in liquid chromatography--impact on qualitative and quantitative performance

1 reference

12 December 2020

Optimization of Exactive Orbitrap™ acquisition parameters for quantitative bioanalysis

1 reference

12 December 2020

Metabonomics study of intestinal fistulas based on ultraperformance liquid chromatography coupled with Q-TOF mass spectrometry (UPLC/Q-TOF MS)

1 reference

12 December 2020