World Endometriosis Research Foundation Endometriosis Phenome and Biobanking Harmonisation Project: IV. Tissue collection, processing, and storage in endometriosis research (Q26827259)

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English	World Endometriosis Research Foundation Endometriosis Phenome and Biobanking Harmonisation Project: IV. Tissue collection, processing, and storage in endometriosis research	scientific article

Statements

scholarly article

1 reference

4 references

13 March 2019

19 September 2019

29 May 2020

1 September 2020

World Endometriosis Research Foundation Endometriosis Phenome and Biobanking Harmonisation Project: IV. Tissue collection, processing, and storage in endometriosis research (English)

1 reference

0 references

3 references

13 March 2019

19 September 2019

1 September 2020

biomedical investigative technique

1 reference

19 September 2019

Lone Hummelshoj

7

object named as

Lone Hummelshoj

1 reference

4

object named as

Paola Viganò

1 reference

10

object named as

Stacey A. Missmer

1 reference

Amelie Fassbender

1

object named as

Amelie Fassbender

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5

object named as

Linda C. Giudice

1 reference

Allison F. Vitonis

3

object named as

Allison F. Vitonis

1 reference

author name string

Nilufer Rahmioglu

2

1 reference

Thomas M. D’Hooghe

6

1 reference

G. David Adamson

8

1 reference

Christian M. Becker

9

1 reference

Krina T. Zondervan

11

1 reference

language of work or name

1 reference

publication date

November 2014

1 reference

1 November 2014

3 references

13 March 2019

19 September 2019

1 September 2020

Fertility and Sterility

4 references

13 March 2019

19 September 2019

1 September 2020

102

1 reference

5

1 reference

1244-53

1 reference

Defining future directions for endometriosis research: workshop report from the 2011 World Congress of Endometriosis In Montpellier, France

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

7 April 2017

Comprehensive molecular portraits of human breast tumours

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

7 April 2017

Molecular pathological epidemiology of colorectal neoplasia: an emerging transdisciplinary and interdisciplinary field

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

7 April 2017

The procurement, storage, and quality assurance of frozen blood and tissue biospecimens in pathology, biorepository, and biobank settings

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

7 April 2017

Guidelines for the design, analysis and interpretation of 'omics' data: focus on human endometrium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

7 April 2017

The role of the peritoneum in the pathogenesis of endometriosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

7 April 2017

How many molecular subtypes? Implications of the unique tumor principle in personalized medicine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

7 April 2017

Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

7 April 2017

Endometrial alterations in endometriosis: a systematic review of putative biomarkers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

7 April 2017

Laser capture microdissection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

7 April 2017

Next Generation Sequencing of Ancient DNA: Requirements, Strategies and Perspectives

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

7 April 2017

The Genotype-Tissue Expression (GTEx) project

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

7 April 2017

World Endometriosis Research Foundation Endometriosis Phenome and Biobanking Harmonization Project: II. Clinical and covariate phenotype data collection in endometriosis research

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

World Endometriosis Research Foundation Endometriosis Phenome and Biobanking Harmonization Project: III. Fluid biospecimen collection, processing, and storage in endometriosis research

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

World Endometriosis Research Foundation Endometriosis Phenome and Biobanking Harmonisation Project: I. Surgical phenotype data collection in endometriosis research

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Identification and use of biomarkers in treatment strategies for triple-negative breast cancer subtypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Functional DNA quantification guides accurate next-generation sequencing mutation detection in formalin-fixed, paraffin-embedded tumor biopsies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Reproducibility of metabolomic profiles among men and women in 2 large cohort studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Genetic heterogeneity in breast cancer: the road to personalized medicine?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Body size and endometriosis: results from 20 years of follow-up within the Nurses' Health Study II prospective cohort.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Measuring microRNA expression levels in oncology: from samples to data analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Biomarkers of endometriosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

The role of targeted therapy and biomarkers in breast cancer treatment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

The NIH Roadmap Epigenomics Program data resource

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Combined mRNA microarray and proteomic analysis of eutopic endometrium of women with and without endometriosis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Ischemic time impacts biological integrity of phospho-proteins in PI3K/Akt, Erk/MAPK, and p38 MAPK signaling networks.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Biobanking human endometrial tissue and blood specimens: standard operating procedure and importance to reproductive biology research and diagnostic development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Nucleic acids extraction from laser microdissected FFPE tissue sections

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

The use of formalin fixed wax embedded tissue for proteomic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Molecular evidence for differences in endometrium in severe versus mild endometriosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Extreme loss of immunoreactive p-Akt and p-Erk1/2 during routine fixation of primary breast cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Impact of biospecimens handling on biomarker research in breast cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Use of laser capture microdissection in studying hormone-dependent diseases: endometriosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

High-quality genomic DNA extraction from formalin-fixed and paraffin-embedded samples deparaffinized using mineral oil.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Priorities for endometriosis research: recommendations from an international consensus workshop.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Standard operating procedures for serum and plasma collection: early detection research network consensus statement standard operating procedure integration working group

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

The effects of timing of fine needle aspiration biopsies on gene expression profiles in breast cancers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

The UK Biobank sample handling and storage validation studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Effect of RNA quality on transcript intensity levels in microarray analysis of human post-mortem brain tissues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Tissue banking in head and neck cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Molecular phenotyping of human endometrium distinguishes menstrual cycle phases and underlying biological processes in normo-ovulatory women

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

HUPO Plasma Proteome Project specimen collection and handling: towards the standardization of parameters for plasma proteome samples

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Stability and heterogeneity of expression profiles in lung cancer specimens harvested following surgical resection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Effect of formalin, acetone, and RNAlater fixatives on tissue preservation and different size amplicons by real-time PCR from paraffin-embedded tissue.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Tissue ischemia time affects gene and protein expression patterns within minutes following surgical tumor excision

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

A Tissue Fixative that Protects Macromolecules (DNA, RNA, and Protein) and Histomorphology in Clinical Samples

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Effect of fixatives and tissue processing on the content and integrity of nucleic acids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Changes in differential gene expression because of warm ischemia time of radical prostatectomy specimens.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Biological stability of RNA isolated from RNAlater-treated brain tumor and neuroblastoma xenografts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 September 2017

Effect of delayed formalin fixation on estrogen and progesterone receptors in breast cancer: a study of three different clones

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

31 May 2018

Different types of small nerve fibers in eutopic endometrium and myometrium in women with endometriosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

31 May 2018

Effect of prolonged formalin fixation on the immunohistochemical reactivity of breast markers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

31 May 2018

Use of urine biomarkers to evaluate menstrual function in healthy premenopausal women

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

31 May 2018

Application of a method for estimating day of ovulation using urinary estrogen and progesterone metabolites.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

31 May 2018

Preservation of nucleic acids and tissue morphology in paraffin-embedded clinical samples: comparison of five molecular fixatives

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

A universal fixation method based on quaternary ammonium salts (RNAlater) for omics-technologies: Saccharomyces cerevisiae as a case study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

Biobanking of fresh-frozen human colon tissues: impact of tissue ex-vivo ischemia times and storage periods on RNA quality

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

RNA stability in human liver: comparison of different processing times, temperatures and methods.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

Protein recovery and identification from the gulf killifish, Fundulus grandis: comparing snap-frozen and RNAlater® preserved tissues.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

Delay to formalin fixation effect on breast biomarkers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

Factors affecting adequacy of Pipelle and Tao Brush endometrial sampling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

Gene expression analysis of endometrium reveals progesterone resistance and candidate susceptibility genes in women with endometriosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

Cervical tissue collection methods for RNA preservation: comparison of snap-frozen, ethanol-fixed, and RNAlater-fixation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

Stability of phosphoprotein as a biological marker of tumor signaling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

RNA degradation in human breast tissue after surgical removal: a time-course study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

Expression profiling of endometrium from women with endometriosis reveals candidate genes for disease-based implantation failure and infertility

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

Effects of Ischemia on Gene Expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230778

28 November 2018

How can macroscopically normal peritoneum contribute to the pathogenesis of endometriosis?

1 reference

https://pubmed.ncbi.nlm.nih.gov/25256928

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of transport conditions on the stability of biochemical markers in blood

1 reference

https://pubmed.ncbi.nlm.nih.gov/25256928

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

New Frontiers in Tumor Marker Studies: From Biobanking to Collaboration in Translational Research

1 reference

https://pubmed.ncbi.nlm.nih.gov/25256928

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biobanking practice: RNA storage at low concentration affects integrity

1 reference

https://pubmed.ncbi.nlm.nih.gov/25256928

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Minimum formalin fixation time for consistent estrogen receptor immunohistochemical staining of invasive breast carcinoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/25256928

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Temperature variations in upright mechanical freezers

1 reference

https://pubmed.ncbi.nlm.nih.gov/25256928

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of fixation period on HER2/neu gene amplification detected by fluorescence in situ hybridization in invasive breast carcinoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/25256928

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The role of myometrial needle biopsies in the diagnosis of adenomyosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/25256928

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The effect of delay in fixation, different fixatives, and duration of fixation in estrogen and progesterone receptor results in breast carcinoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/25256928

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Application of a method for estimating day of ovulation using urinary estrogen and progesterone metabolites

1 reference

https://api.crossref.org/works/10.1016%2FJ.FERTNSTERT.2014.07.1209

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1016/J.FERTNSTERT.2014.07.1209

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