Directed evolution: an evolving and enabling synthetic biology tool (Q26823011)

Tong Si

series ordinal

2

1 reference

Huimin Zhao

series ordinal

3

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language of work or name

1 reference

August 2012

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Current Opinion in Chemical Biology

published in

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volume

16

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issue

3-4

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page(s)

285-91

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Exploiting models of molecular evolution to efficiently direct protein engineering

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Reconstructed evolutionary adaptive paths give polymerases accepting reversible terminators for sequencing and SNP detection

7 April 2017

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A De Novo Protein Binding Pair By Computational Design and Directed Evolution

7 April 2017

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Directed Evolution of a Thermostable Quorum-quenching Lactonase from the Amidohydrolase Superfamily

7 April 2017

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Precise manipulation of chromosomes in vivo enables genome-wide codon replacement

7 April 2017

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Encoding multiple unnatural amino acids via evolution of a quadruplet-decoding ribosome

7 April 2017

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Programming cells by multiplex genome engineering and accelerated evolution

7 April 2017

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Enzymatic assembly of DNA molecules up to several hundred kilobases

7 April 2017

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Complete chemical synthesis, assembly, and cloning of a Mycoplasma genitalium genome

7 April 2017

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Synthetic chromosome arms function in yeast and generate phenotypic diversity by design

7 April 2017

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Reiterative Recombination for the in vivo assembly of libraries of multigene pathways.

28 September 2017

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Toward rational design of bacterial genomes

28 September 2017

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Programming microbial population dynamics by engineered cell-cell communication

28 September 2017

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Multiplexed genome engineering and genotyping methods applications for synthetic biology and metabolic engineering

28 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

From SELEX to cell dual selections for synthetic riboswitches

28 September 2017

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Directed evolution of promoters and tandem gene arrays for customizing RNA synthesis rates and regulation

28 September 2017

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Engineering genomes in multiplex

28 September 2017

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Synthetic biology: putting synthesis into biology

28 September 2017

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A nucleoside kinase as a dual selector for genetic switches and circuits

28 September 2017

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Prospecting metagenomic enzyme subfamily genes for DNA family shuffling by a novel PCR-based approach

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

PCRless library mutagenesis via oligonucleotide recombination in yeast

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Engineered DNA polymerases in biotechnology

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Rapid profiling of a microbial genome using mixtures of barcoded oligonucleotides

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

The synthetic integron: an in vivo genetic shuffling device

28 September 2017

1 reference

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Synthesizing a novel genetic sequential logic circuit: a push-on push-off switch

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Next-generation synthetic gene networks

28 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Beyond directed evolution: Darwinian selection as a tool for synthetic biology

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Automated design of synthetic ribosome binding sites to control protein expression

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Rapid evolution of functional complexity in a domain family

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Engineering multicellular systems by cell-cell communication.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Synthesis of orthogonal transcription-translation networks

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Protein and genome evolution in Mammalian cells for biotechnology applications

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

An efficient platform for genetic selection and screening of gene switches in Escherichia coli

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

DNA assembler, an in vivo genetic method for rapid construction of biochemical pathways

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Construction and enhancement of a minimal genetic and logic gate

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Directed evolution of Vibrio fischeri LuxR for improved response to butanoyl-homoserine lactone

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Combinatorial engineering of intergenic regions in operons tunes expression of multiple genes

28 September 2017

1 reference

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Tuning genetic control through promoter engineering

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Directed evolution of Vibrio fischeri LuxR for increased sensitivity to a broad spectrum of acyl-homoserine lactones

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Genome shuffling leads to rapid phenotypic improvement in bacteria

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Evolutionary engineering of industrially important microbial phenotypes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

A system for the continuous directed evolution of biomolecules

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Evolving a robust signal transduction pathway from weak cross-talk

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

De novo generation of mutually orthogonal aminoacyl-tRNA synthetase/tRNA pairs.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Modularity of MAP kinases allows deformation of their signalling pathways

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Directed evolution of LuxI for enhanced OHHL production

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Synthetic inter-species cooperation of host and virus for targeted genetic evolution

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

A genetic circuit system based on quorum sensing signaling for directed evolution of quorum-quenching enzymes.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Regulation of beta-lactamase activity by remote binding of heme: functional coupling of unrelated proteins through domain insertion

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Improvement of Bacillus circulans beta-amylase activity attained using the ancestral mutation method.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Directed evolution of orthogonal ligand specificity in a single scaffold

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Evolved orthogonal ribosomes enhance the efficiency of synthetic genetic code expansion.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Engineering yeast transcription machinery for improved ethanol tolerance and production.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3424333

Customized optimization of metabolic pathways by combinatorial transcriptional engineering

28 November 2018

1 reference

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