Hybrid vigor: hybrid methods in viral structure determination (Q26810040)

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David Ian Stuart

object named as

David I Stuart

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author name string

Robert J Gilbert

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David I Stuart

Advances in Protein Chemistry

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language of work or name

English

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publication date

2003

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published in

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volume

64

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page(s)

37-91

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cites work

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Physical Principles in the Construction of Regular Viruses

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Mass Spectrometry of an Intact Virus The authors gratefully acknowledge Jennifer Boydston for her helpful comments and suggestions. G.S. is grateful for support from the NIH (GM55775). The work at LBL was supported by the Director, Office of Energy

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Cryo-Electron Microscopy Reveals the Functional Organization of an Enveloped Virus, Semliki Forest Virus

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Combined EM/X-ray imaging yields a quasi-atomic model of the adenovirus-related bacteriophage PRD1 and shows key capsid and membrane interactions

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Three-dimensional interaction of Phi29 pRNA dimer probed by chemical modification interference, cryo-AFM, and cross-linking

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Atomic structure of the major capsid protein of rotavirus: implications for the architecture of the virion

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Intracellular membrane fusion: SNAREs only?

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Structure determination of the bacteriophage phiX174

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Atomic force microscopy applications in macromolecular crystallography

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Elucidation of crystal packing by X-ray diffraction and freeze-etching electron microscopy. Studies on GTP cyclohydrolase I of Escherichia coli

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Spatial proximity of the HIV-1 nucleocapsid protein zinc fingers investigated by time-resolved fluorescence and fluorescence resonance energy transfer.

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The oversampling phasing method

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An approach to three-dimensional structures of biomolecules by using single-molecule diffraction images

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Crystal structure of dimeric HIV-1 capsid protein

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7 January 2021

Cryoelectron-microscopy image reconstruction of symmetry mismatches in bacteriophage phi29

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Determination of the structure of the nucleocapsid protein NCp7 from the human immunodeficiency virus type 1 by 1H NMR

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7 January 2021

On the rigidity of RNA in tomato bushy stunt virus

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7 January 2021

Visualization of protein-nucleic acid interactions in a virus. Refined structure of intact tobacco mosaic virus at 2.9 A resolution by X-ray fiber diffraction

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7 January 2021

Further evidence for hexagonal organization of HIV gag protein in prebudding assemblies and immature virus-like particles.

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7 January 2021

Structure of the reovirus outer capsid and dsRNA-binding protein sigma3 at 1.8 A resolution

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7 January 2021

Structure of tomato busy stunt virus IV. The virus particle at 2.9 A resolution

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7 January 2021

Structure of a human rhinovirus complexed with its receptor molecule

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7 January 2021

The structure of isometric capsids of bacteriophage T4.

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7 January 2021

Solution scattering study on the structure of alfalfa mosaic virus strain VRU.

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Structure of keyhole limpet hemocyanin type 1 (KLH1) at 15 Å resolution by electron cryomicroscopy and angular reconstitution † 1 †This article is dedicated to the memory of Anneke van Heel. 1Edited by M.F. Moody

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Structure of alpha-latrotoxin oligomers reveals that divalent cation-dependent tetramers form membrane pores

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Structural and serological evidence for a novel mechanism of antigenic variation in foot-and-mouth disease virus

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7 January 2021

Structure of the U2 strain of tobacco mosaic virus refined at 3.5 A resolution using X-ray fiber diffraction

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The protein capsid of filamentous bacteriophage PH75 from Thermus thermophilus

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Locations of carbohydrate sites on alphavirus glycoproteins show that E1 forms an icosahedral scaffold

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7 January 2021

X-ray crystallographic structure of the Norwalk virus capsid

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7 January 2021

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A data mining approach for analyzing density maps representing macromolecular structures

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7 January 2021

Structure of the reovirus core at 3.6 A resolution

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https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Three-dimensional structure of the adenovirus major coat protein hexon

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure of the expanded state of tomato bushy stunt virus

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Fitting atomic models into electron-microscopy maps

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure of a human common cold virus and functional relationship to other picornaviruses

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Bacteriophage PRD1 contains a labile receptor-binding structure at each vertex

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Fourier amplitude decay of electron cryomicroscopic images of single particles and effects on structure determination

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Minor proteins, mobile arms and membrane-capsid interactions in the bacteriophage PRD1 capsid

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Peripherally biased distribution of antigen proteins on the recombinant yeast-derived human hepatitis B virus surface antigen vaccine particle: structural characteristics revealed by small-angle neutron scattering using the contrast variation method

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Membrane structure of the hepatitis B virus surface antigen particle

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Scaling structure factor amplitudes in electron cryomicroscopy using X-Ray solution scattering

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Domain rotations between open, closed and bullet-shaped forms of the thermosome, an archaeal chaperonin

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure of the bacteriophage phi29 DNA packaging motor

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Probing viruses with mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Mass spectrometry and viral analysis

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

The bacteriophage straight phi29 portal motor can package DNA against a large internal force

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure of a human rhinovirus-bivalently bound antibody complex: implications for viral neutralization and antibody flexibility

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Neutralizing antibody to human rhinovirus 14 penetrates the receptor-binding canyon.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

A method for differentiating proteins from nucleic acids in intermediate-resolution density maps: cryo-electron microscopy defines the quaternary structure of the Escherichia coli 70S ribosome

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure of the 80S ribosome from Saccharomyces cerevisiae--tRNA-ribosome and subunit-subunit interactions

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structures of the native and swollen forms of cowpea chlorotic mottle virus determined by X-ray crystallography and cryo-electron microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Large-scale movement of elongation factor G and extensive conformational change of the ribosome during translocation

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Image reconstruction reveals the complex molecular organization of adenovirus

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Preliminary crystallographic studies of bacteriophage T4 fibritin confirm a trimeric coiled-coil structure

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure of bacteriophage T4 fibritin M: a troublesome packing arrangement

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Tobacco mosaic virus particle structure and the initiation of disassembly

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure of RNA and RNA binding site in tobacco mosaic virus from 4-A map calculated from X-ray fibre diagrams

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

The structure of southern bean mosaic virus at 5 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Nucleocapsid zinc fingers detected in retroviruses: EXAFS studies of intact viruses and the solution‐state structure of the nucleocapsid protein from HIV‐1

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Atomic structure of a thermostable subdomain of HIV-1 gp41

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

The structure of pariacoto virus reveals a dodecahedral cage of duplex RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure of bacteriophage T4 fibritin: a segmented coiled coil and the role of the C-terminal domain

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Assembly of a tailed bacterial virus and its genome release studied in three dimensions

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

When two into one won't go: fitting in the presence of steric hindrance and partial occupancy

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Bivalent binding of a neutralising antibody to a calicivirus involves the torsional flexibility of the antibody hinge

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Antibody inhibition of the transcriptase activity of the rotavirus DLP: a structural view

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

The three-dimensional distribution of RNA and protein in the interior of tomato bushy stunt virus: a neutron low-resolution single-crystal diffraction study

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Electrospray Time-of-Flight Mass Spectrometry of the Intact MS2 Virus Capsid

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Two concentric protein shell structure with spikes of silkworm Bombyx mori cytoplasmic polyhedrosis virus revealed by small-angle neutron scattering using the contrast variation method

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure, interactions and dynamics of PRD1 virus I. Coupling of subunit folding and capsid assembly

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure, interactions and dynamics of PRD1 virus II. Organization of the viral membrane and DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Hydrogen-deuterium exchange as a probe of folding and assembly in viral capsids

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structural biology of HIV.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

The three-dimensional structure of a DNA translocating machine at 10 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Single-particle electron cryo-microscopy: towards atomic resolution.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

A triple beta-spiral in the adenovirus fibre shaft reveals a new structural motif for a fibrous protein

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

The organization of the spike complex of Semliki Forest virus

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Flexibility of the major antigenic loop of foot-and-mouth disease virus bound to a Fab fragment of a neutralising antibody: structure and neutralisation

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure determination of cucumber green mottle mosaic virus by X-ray fiber diffraction. Significance for the evolution of tobamoviruses

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure of ribgrass mosaic virus at 2.9 A resolution: evolution and taxonomy of tobamoviruses

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Detecting structural changes in viral capsids by hydrogen exchange and mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Atomic structure of the ectodomain from HIV-1 gp41

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Biochemical and structural analysis of isolated mature cores of human immunodeficiency virus type 1.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Analysis of X-ray diffraction from fibres of Pf1 Inovirus (filamentous bacteriophage) shows that the DNA in the virion is not highly ordered

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure of the capsid of Pf3 filamentous phage determined from X-ray fibre diffraction data at 3.1 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Topologically linked protein rings in the bacteriophage HK97 capsid

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Towards the structure of the human immunodeficiency virus: divide and conquer

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Organization of immature human immunodeficiency virus type 1

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure of the 30S ribosomal subunit

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Tomato bushy stunt virus at 5.5-A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Organization of turnip yellow mosaic virus investigated by neutron small angle scattering at 80 K: an intermediate state preceding decapsidation of the virion?

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

The morphology of the polyhedra of a host range-expanded recombinant baculovirus and its parents

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

The antigenic structure of the HIV gp120 envelope glycoprotein

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

The crystal structure of the human hepatitis B virus capsid

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Interaction of coxsackievirus A21 with its cellular receptor, ICAM-1.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure and assembly of large lipid-containing dsDNA viruses

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Function of hexameric RNA in packaging of bacteriophage phi 29 DNA in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Structure of the Maize streak virus geminate particle

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Effects of characteristic x rays on the noise power spectra and detective quantum efficiency of photoconductive x-ray detectors

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Seeing the herpesvirus capsid at 8.5 A

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Electron cryomicroscopy and bioinformatics suggest protein fold models for rice dwarf virus

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

A theoretical model successfully identifies features of hepatitis B virus capsid assembly

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Mechanism of capsid assembly for an icosahedral plant virus

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

The structure of the adenovirus capsid. II. The packing symmetry of hexon and its implications for viral architecture

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

NMR trial models: experiences with the colicin immunity protein Im7 and the p85alpha C-terminal SH2-peptide complex

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021

Visualization of protein-RNA interactions in cytoplasmic polyhedrosis virus

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3233%2803%2901002-7

7 January 2021