The evolution of methods for establishing evolutionary timescales (Q26744207)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27325838%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

review article

2 references

18 November 2020

The evolution of methods for establishing evolutionary timescales (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27325838%20AND%20SRC:MED&resulttype=core&format=json

biomedical investigative technique

14 March 2020

main subject

1 reference

19 September 2019

1 reference

18 November 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27325838%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

Yang Ziheng

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27325838%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

author name string

Ziheng Yang

series ordinal

2

0 references

language of work or name

English

0 references

publication date

1 July 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27325838%20AND%20SRC:MED&resulttype=core&format=json

Philosophical Transactions of the Royal Society B

14 March 2020

19 July 2016

1 reference

18 November 2020

3 references

19 September 2019

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27325838%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

18 November 2020

371

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27325838%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

issue

1699

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27325838%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

14 March 2020

page(s)

20160020

0 references

copyright license

2 references

19 September 2019

Relaxed phylogenetics and dating with confidence

18 November 2020

0 references

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Using the fossil record to estimate the age of the last common ancestor of extant primates

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Evolution of the angiosperms: calibrating the family tree

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Quality of the fossil record through time

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Molecular evidence for the early colonization of land by fungi and plants

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Bayesian phylogenetic inference using DNA sequences: a Markov Chain Monte Carlo Method

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Continental breakup and the ordinal diversification of birds and mammals

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Assessment of available anatomical characters for linking living mammals to fossil taxa in phylogenetic analyses

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Tips and nodes are complementary not competing approaches to the calibration of molecular clocks

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

How Well Can We Detect Lineage-Specific Diversification-Rate Shifts? A Simulation Study of Sequential AIC Methods

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Total-Evidence Dating under the Fossilized Birth-Death Process

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Bayesian analysis of a morphological supermatrix sheds light on controversial fossil hominin relationships

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Origin and diversification of living cycads: a cautionary tale on the impact of the branching process prior in Bayesian molecular dating

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

A Protocol for Diagnosing the Effect of Calibration Priors on Posterior Time Estimates: A Case Study for the Cambrian Explosion of Animal Phyla

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Bias and sensitivity in the placement of fossil taxa resulting from interpretations of missing data.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Calibration uncertainty in molecular dating analyses: there is no substitute for the prior evaluation of time priors

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Ancient dates or accelerated rates? Morphological clocks and the antiquity of placental mammals

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

The fossilized birth-death process for coherent calibration of divergence-time estimates

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Fossilization causes organisms to appear erroneously primitive by distorting evolutionary trees

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Estimating divergence times in large molecular phylogenies

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

A total-evidence approach to dating with fossils, applied to the early radiation of the hymenoptera

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

A timeline for terrestrialization: consequences for the carbon cycle in the Palaeozoic

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Exploring uncertainty in the calibration of the molecular clock

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Dating primate divergences through an integrated analysis of palaeontological and molecular data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Divergence time and evolutionary rate estimation with multilocus data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

A likelihood approach to estimating phylogeny from discrete morphological character data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Estimating the rate of evolution of the rate of molecular evolution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Rocks and clocks: calibrating the Tree of Life using fossils and molecules

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Inferring speciation times under an episodic molecular clock

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Reading the entrails of chickens: molecular timescales of evolution and the illusion of precision

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Performance of a divergence time estimation method under a probabilistic model of rate evolution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

The non-uniformity of fossil preservation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Time-calibrated models support congruency between Cretaceous continental rifting and titanosaurian evolutionary history

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Advances in Time Estimation Methods for Molecular Data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Bayesian molecular clock dating of species divergences in the genomics era.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Dating Tips for Divergence-Time Estimation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Dinosaur evolution. Sustained miniaturization and anatomical innovation in the dinosaurian ancestors of birds

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Morphological clocks in paleontology, and a mid-Cretaceous origin of crown Aves

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Divergence time estimation using fossils as terminal taxa and the origins of Lissamphibia.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

A phylogeny of Cenozoic macroperforate planktonic foraminifera from fossil data.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Sampling-through-time in birth-death trees

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

The impact of the representation of fossil calibrations on Bayesian estimation of species divergence times

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Land animals in the silurian: arachnids and myriapods from shropshire, England

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Precision of molecular time estimates

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

The amino acid sequence of cytochrome c from Helix aspersa Müller (garden snail).

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920342

Evolution and speciation in the Eocene planktonic foraminifer Turborotalia

28 September 2017

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

The fossil record and evolution: comparing cladistic and paleontologic evidence for vertebrate history

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Evolutionary Divergence and Convergence in Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Molecular Evidence for Deep Precambrian Divergences Among Metazoan Phyla

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Scales of thelodont and shark-like fishes from the Ordovician of Colorado

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Upper Ordovician chondrichthyan-like scales from North America

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

A Nonparametric Approach to Estimating Divergence Times in the Absence of Rate Constancy

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Comparison of Likelihood and Bayesian Methods for Estimating Divergence Times Using Multiple Gene Loci and Calibration Points, with Application to a Radiation of Cute-Looking Mouse Lemur Species

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Molecular timescales and the fossil record: a paleontological perspective

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Four well-constrained calibration points from the vertebrate fossil record for molecular clock estimates

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Confidence intervals for pulsed mass extinction events

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Amniote Phylogeny and the Importance of Fossils

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Non-random decay of chordate characters causes bias in fossil interpretation

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Phylogenetic investigation of the complex evolutionary history of dispersal mode and diversification rates across living and fossil Fagales

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Stratocladistics: Integrating Temporal Data and Character Data in Phylogenetic Inference

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Sampling bias and the fossil record of planktonic foraminifera on land and in the deep sea

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

Evolution of Protein Molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

7 January 2021

Stratigraphy in phylogeny reconstruction—comment on Smith (2000)

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

7 January 2021

Bayesian Total-Evidence Dating Reveals the Recent Crown Radiation of Penguins.

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

7 January 2021

The role of experiments in investigating the taphonomy of exceptional preservation

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2016.0020

7 January 2021

Identifiers

DOI

10.1098/RSTB.2016.0020

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27325838%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27325838%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

2 references