Intronic binding sites for hnRNP A/B and hnRNP F/H proteins stimulate pre-mRNA splicing (Q25256959)

1

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Jean-François Fisette

2

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Faiz-ul Hassan Nasim

3

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Richard Madden

4

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Mélanie Cordeau

5

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Benoit Chabot

Creative Commons Attribution 4.0 International

6

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language of work or name

English

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publication date

February 2006

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published in

PLOS Biology

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volume

4

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page(s)

e21

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issue

2

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copyright license

start time

10 January 2006

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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hnRNP H binding at the 5' splice site correlates with the pathological effect of two intronic mutations in the NF-1 and TSHbeta genes

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Distinct sets of adjacent heterogeneous nuclear ribonucleoprotein (hnRNP) A1/A2 binding sites control 5' splice site selection in the hnRNP A1 mRNA precursor

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Binding of hnRNP H to an exonic splicing silencer is involved in the regulation of alternative splicing of the rat beta-tropomyosin gene

28 September 2017

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28 September 2017

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Telomere elongation by hnRNP A1 and a derivative that interacts with telomeric repeats and telomerase

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Intron self-complementarity enforces exon inclusion in a yeast pre-mRNA

28 September 2017

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G triplets located throughout a class of small vertebrate introns enforce intron borders and regulate splice site selection

28 September 2017

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An intron element modulating 5' splice site selection in the hnRNP A1 pre-mRNA interacts with hnRNP A1.

28 September 2017

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An intronic (A/U)GGG repeat enhances the splicing of an alternative intron of the chicken beta-tropomyosin pre-mRNA

28 September 2017

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RNA binding specificity of hnRNP A1: significance of hnRNP A1 high-affinity binding sites in pre-mRNA splicing

28 September 2017

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RNA structural patterns and splicing: molecular basis for an RNA-based enhancer.

28 September 2017

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Recombinant hnRNP protein A1 and its N-terminal domain show preferential affinity for oligodeoxynucleotides homologous to intron/exon acceptor sites

28 September 2017

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Targeted snRNP depletion reveals an additional role for mammalian U1 snRNP in spliceosome assembly

28 September 2017

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hnRNP A2/B1 binds specifically to single stranded vertebrate telomeric repeat TTAGGGn

28 September 2017

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Specific accessory sequences in Saccharomyces cerevisiae introns control assembly of pre-mRNAs into spliceosomes

28 September 2017

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High-affinity hnRNP A1 binding sites and duplex-forming inverted repeats have similar effects on 5' splice site selection in support of a common looping out and repression mechanism

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1326234

Intramolecular structure in yeast introns aids the early steps of in vitro spliceosome assembly.

31 May 2018

1 reference

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An intron splicing enhancer containing a G-rich repeat facilitates inclusion of a vertebrate micro-exon.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1326234

The generally expressed hnRNP F is involved in a neural-specific pre-mRNA splicing event

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1326234

(A)GGG(A), (A)CCC(A) and other potential 3' splice signals in primate nuclear pre-mRNA sequences.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1326234

Conserved quartets near 5' intron junctions in primate nuclear pre-mRNA.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1326234

Conserved signals around the 5' splice sites in eukaryotic nuclear precursor mRNAs: G-runs are frequent in the introns and C in the exons near both 5' and 3' splice sites.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1326234

G+C-rich tract in 5' end of human introns.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1326234

Regulation of 3' splice site selection in the 844ins68 polymorphism of the cystathionine Beta -synthase gene.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1326234

hnRNP A1 selectively interacts through its Gly-rich domain with different RNA-binding proteins

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16396608

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Heterogeneous nuclear ribonucleoprotein F/H proteins modulate the alternative splicing of the apoptotic mediator Bcl-x

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16396608

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PBIO.0040021

1 reference

254262

254262

1 reference

1 reference

1 reference