MEDock: a web server for efficient prediction of ligand binding sites based on a novel optimization algorithm (Q24813590)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15991337%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

title

MEDock: a web server for efficient prediction of ligand binding sites based on a novel optimization algorithm (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15991337%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

1 reference

1 reference

optimization algorithm

1 reference

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15991337%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

author name string

Darby Tien-Hau Chang

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15991337%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Yen-Jen Oyang

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15991337%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

language of work or name

English

0 references

publication date

1 July 2005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15991337%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15991337%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

volume

33

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15991337%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

issue

Web Server issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15991337%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

page(s)

W233-8

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15991337%20AND%20SRC:MED&resulttype=core&format=json

HIV-1 protease molecular dynamics of a wild-type and of the V82F/I84V mutant: possible contributions to drug resistance and a potential new target site for drugs

13 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Toward an outline of the topography of a realistic protein-folding funnel

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Protein folding funnels: a kinetic approach to the sequence-structure relationship

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

PRODRG: a tool for high-throughput crystallography of protein-ligand complexes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

PDB2PQR: an automated pipeline for the setup of Poisson-Boltzmann electrostatics calculations

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Navigating chemical space for biology and medicine

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Glide: a new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Principles of docking: An overview of search algorithms and a guide to scoring functions

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Funnels, pathways, and the energy landscape of protein folding: a synthesis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Virtual screening of chemical libraries

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Docking and scoring in virtual screening for drug discovery: methods and applications

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Virtual screening in lead discovery and optimization.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

High-throughput docking as a source of novel drug leads

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

ProteMiner-SSM: a web server for efficient analysis of similar protein tertiary substructures

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Comparative study of several algorithms for flexible ligand docking

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

GEMDOCK: a generic evolutionary method for molecular docking.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

The many roles of computation in drug discovery

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Novel technologies for virtual screening

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Protein flexibility in ligand docking and virtual screening to protein kinases.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

The relaxed complex method: Accommodating receptor flexibility for drug design with an improved scoring scheme

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Computational drug design accommodating receptor flexibility: the relaxed complex scheme

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160262

Chemical space and biology

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15991337

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Principles of docking: An overview of search algorithms and a guide to scoring functions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15991337

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKI586

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15991337%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

DBLP publication ID

journals/nar/ChangOL05

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15991337%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

1 reference