Correlating overrepresented upstream motifs to gene expression: a computational approach to regulatory element discovery in eukaryotes (Q24803044)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11876822%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

title

Correlating overrepresented upstream motifs to gene expression: a computational approach to regulatory element discovery in eukaryotes (English)

1 reference

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7 December 2019

1

1 reference

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7 December 2019

Ferdinando Di Cunto

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11876822%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

author name string

Paolo Provero

series ordinal

3

1 reference

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7 December 2019

language of work or name

English

0 references

publication date

14 February 2002

1 reference

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7 December 2019

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7 December 2019

volume

3

1 reference

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7 December 2019

issue

1

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page(s)

7

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https://scigraph.springernature.com/pub.10.1186/1471-2105-3-7

7 December 2019

exact match

0 references

cites work

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A computational genomics approach to the identification of gene networks

7 April 2017

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Exploring the metabolic and genetic control of gene expression on a genomic scale

7 April 2017

1 reference

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Feasting, fasting and fermenting. Glucose sensing in yeast and other cells

7 April 2017

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The Saccharomyces cerevisiae zinc finger proteins Msn2p and Msn4p are required for transcriptional induction through the stress response element (STRE)

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=77394

Identifying regulatory networks by combinatorial analysis of promoter elements

7 April 2017

1 reference

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Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae

7 April 2017

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Systematic determination of genetic network architecture

7 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=77394

Yeast MIG1 repressor is related to the mammalian early growth response and Wilms' tumour finger proteins

7 April 2017

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Discovering regulatory elements in non-coding sequences by analysis of spaced dyads

7 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=77394

Extracting regulatory sites from the upstream region of yeast genes by computational analysis of oligonucleotide frequencies.

28 September 2017

1 reference

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Analysis of a meiosis-specific URS1 site: sequence requirements and involvement of replication protein A.

28 September 2017

1 reference

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Functional domains in the Mig1 repressor.

28 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=77394

Identification of cis and trans components of a novel heat shock stress regulatory pathway in Saccharomyces cerevisiae

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=77394

Ubiquitous upstream repression sequences control activation of the inducible arginase gene in yeast

28 September 2017

1 reference

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Regulatory element detection using correlation with expression.

28 September 2017

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RPC19, the gene for a subunit common to yeast RNA polymerases A (I) and C (III).

30 May 2018

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A web site for the computational analysis of yeast regulatory sequences

30 May 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11876822

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Transcriptional control of the yeast acetyl-CoA synthetase gene, ACS1, by the positive regulators CAT8 and ADR1 and the pleiotropic repressor UME6

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11876822

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-3-7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11876822%20AND%20SRC:MED&resulttype=core&format=json

journals/bmcbi/CaselleCP02

7 December 2019

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11876822%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

1 reference