Lineage-specific expansions of retroviral insertions within the genomes of African great apes but not humans and orangutans (Q24794907)

2 July 2017

Lineage-specific expansions of retroviral insertions within the genomes of African great apes but not humans and orangutans (English)

1 reference

2 July 2017

3

1 reference

2 July 2017

10

0 references

John McPherson

8

0 references

Philipp Khaitovich

5

object named as

Philipp Khaitovich

1 reference

2 July 2017

11

Evan E Eichler

1 reference

2 July 2017

9

Shaying Zhao

1 reference

2 July 2017

7

Marla Y Eichler

1 reference

2 July 2017

2

Zhaoshi Jiang

1 reference

2 July 2017

Chris T Yohn

1

1 reference

2 July 2017

Karen E Hayden

4

1 reference

2 July 2017

Matthew E Johnson

6

1 reference

2 July 2017

language of work or name

English

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publication date

1 March 2005

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2 July 2017

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2 July 2017

3

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2 July 2017

4

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2 July 2017

e110

1 reference

Creative Commons Attribution 4.0 International

2 July 2017

start time

1 March 2005

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Long-term reinfection of the human genome by endogenous retroviruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Genomewide comparison of DNA sequences between humans and chimpanzees

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Initial sequencing and analysis of the human genome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Genomic divergences between humans and other hominoids and the effective population size of the common ancestor of humans and chimpanzees

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Finishing the euchromatic sequence of the human genome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

A new hominid from the Upper Miocene of Chad, Central Africa

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Consed: a graphical tool for sequence finishing

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Geology and palaeontology of the Late Miocene Middle Awash valley, Afar rift, Ethiopia

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Retroviruses and primate evolution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Differential alu mobilization and polymorphism among the human and chimpanzee lineages

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Genomically intact endogenous feline leukemia viruses of recent origin

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Estimating ancestral population sizes and divergence times

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

The mosaic structure of human pericentromeric DNA: a strategy for characterizing complex regions of the human genome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

The genomic record of Humankind's evolutionary roots

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Distribution of baboon endogenous virus among species of African monkeys suggests multiple ancient cross-species transmissions in shared habitats

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Transcription start regions in the human genome are favored targets for MLV integration

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

HIV-1 integration in the human genome favors active genes and local hotspots

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Regional patterns of gene expression in human and chimpanzee brains

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Earliest Miocene hominoid from Southeast Asia

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

A Middle Miocene hominoid from Thailand and orangutan origins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Retroelement distributions in the human genome: variations associated with age and proximity to genes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Evidence for an ancient selective sweep in the MHC class I gene repertoire of chimpanzees

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Isolation and analysis of retroviral integration targets by solo long terminal repeat inverse PCR

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Evidence for genomic rearrangements mediated by human endogenous retroviruses during primate evolution

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Novel polymorphism in the FMR1 gene resulting in a "pseudodeletion" of FMR1 in a commonly used fragile X assay

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Identification and characterization of novel human endogenous retrovirus families by phylogenetic screening of the human genome mapping project database

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Papio cynocephalus endogenous retrovirus among old world monkeys: evidence for coevolution and ancient cross-species transmissions

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Interclass transmission and phyletic host tracking in murine leukemia virus-related retroviruses.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

The evolutionary relationships of man and orang-utans

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Molecular cloning of a family of retroviral sequences found in chimpanzee but not human DNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

The Lake Casitas wild mouse:Evolving genetic resistance to retroviral disease

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Evolution of type C viral genes: evidence for an Asian origin of man

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Isolation from the asian mouse Mus caroli of an endogenous type C virus related to infectious primate type C viruses

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Miropeats: graphical DNA sequence comparisons.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Insertional mutagenesis by retroviruses and promoter traps in embryonic stem cells

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1054887

Characterization of the intragenomic spread of the human endogenous retrovirus family HERV-W.

30 May 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.0030110

Identification of a novel type C porcine endogenous retrovirus: evidence that copy number of endogenous retroviruses increases during host inbreeding.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.0030110

The MEV mouse linkage testing stock: mapping 30 novel proviral insertions and establishment of an improved stock

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15737067

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Retrotransposons as epigenetic mediators of phenotypic variation in mammals

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15737067

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The human endogenous retrovirus family HERV-K(HML-3)

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15737067

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PBIO.0030110

1 reference

OpenCitations bibliographic resource ID

2 July 2017

1803846

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference