The structural alignment between two proteins: is there a unique answer? (Q24673989)

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

A Method to Identify Protein Sequences That Fold into a Known Three-Dimensional Structure

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

A new approach to protein fold recognition

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

One thousand families for the molecular biologist

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

A 3D sequence-independent representation of the protein data bank

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

Regularities in interaction patterns of globular proteins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

Structural features can be unconserved in proteins with similar folds. An analysis of side-chain to side-chain contacts secondary structure and accessibility.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

Why do globular proteins fit the limited set of folding patterns?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

Definition of general topological equivalence in protein structures. A procedure involving comparison of properties and relationships through simulated annealing and dynamic programming

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

Suboptimal sequence alignment in molecular biology

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

Topology fingerprint approach to the inverse protein folding problem

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

A simple method to generate non-trivial alternate alignments of protein sequences.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

An efficient automated computer vision based technique for detection of three dimensional structural motifs in proteins

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

Recurring structural motifs in proteins with different functions.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

Volume changes in protein evolution.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

Flexible algorithm for direct multiple alignment of protein structures and sequences.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143456

An assessment of amino acid exchange matrices in aligning protein sequences: the twilight zone revisited

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8819165

12 December 2020

inferred from PubMed ID database lookup

Evolution of proteins formed by beta-sheets. I. Plastocyanin and azurin

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8819165

12 December 2020

inferred from PubMed ID database lookup

Catching a common fold

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560050711

7 January 2021

Comparison of the structures of globins and phycocyanins: evidence for evolutionary relationship

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560050711

7 January 2021

Protein structure prediction by threading methods: evaluation of current techniques

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560050711

7 January 2021

Significance of root-mean-square deviation in comparing three-dimensional structures of globular proteins

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560050711

7 January 2021

Protein structure alignment

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560050711

7 January 2021

Use of techniques derived from graph theory to compare secondary structure motifs in proteins

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560050711

7 January 2021

Determination of reliable regions in protein sequence alignments

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560050711

7 January 2021

A data bank merging related protein structures and sequences

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560050711

7 January 2021

Protein structure comparisons using a combination of a genetic algorithm, dynamic programming and least-squares minimization

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560050711

7 January 2021

The protein threading problem with sequence amino acid interaction preferences is NP-complete

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560050711

7 January 2021

A discussion of the solution for the best rotation to relate two sets of vectors

1 reference

https://api.crossref.org/works/10.1002%2FPRO.5560050711

7 January 2021