Confirmation of a second natural preQ1 aptamer class in Streptococcaceae bacteria (Q24650494)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18305186%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

title

Confirmation of a second natural preQ1 aptamer class in Streptococcaceae bacteria (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18305186%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

Streptococcaceae

1 reference

5

1 reference

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3 January 2020

author name string

Michelle M Meyer

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18305186%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

Adam Roth

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18305186%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

Stephanie M Chervin

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18305186%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

George A Garcia

4

1 reference

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3 January 2020

language of work or name

English

0 references

publication date

27 February 2008

1 reference

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3 January 2020

1 reference

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3 January 2020

volume

14

1 reference

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3 January 2020

page(s)

685-695

1 reference

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3 January 2020

issue

4

1 reference

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describes a project that uses

3 January 2020

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2271366/fullTextXML

inferred from PubMed Central ID database lookup

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7 April 2017

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Evidence for a second class of S-adenosylmethionine riboswitches and other regulatory RNA motifs in alpha-proteobacteria

7 April 2017

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7 April 2017

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New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control

7 April 2017

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The riboswitch-mediated control of sulfur metabolism in bacteria

7 April 2017

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Improvement of reading frame maintenance is a common function for several tRNA modifications

7 April 2017

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Queuosine modification of the wobble base in tRNAHis influences 'in vivo' decoding properties

7 April 2017

1 reference

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Biosynthesis of the modified nucleoside Q in transfer RNA

7 April 2017

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Structure determination of a nucleoside Q precursor isolated from E. coli tRNA: 7-{aminomethyl)-7-deazaguanosine

7 April 2017

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A riboswitch selective for the queuosine precursor preQ1 contains an unusually small aptamer domain

7 April 2017

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The S(MK) box is a new SAM-binding RNA for translational regulation of SAM synthetase

7 April 2017

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Structural basis for discriminative regulation of gene expression by adenine- and guanine-sensing mRNAs

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

Structure of a natural guanine-responsive riboswitch complexed with the metabolite hypoxanthine

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

Adenine riboswitches and gene activation by disruption of a transcription terminator

7 April 2017

1 reference

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Identification of four genes necessary for biosynthesis of the modified nucleoside queuosine

7 April 2017

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An mRNA structure that controls gene expression by binding S-adenosylmethionine

7 April 2017

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Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

Comparative genomics of thiamin biosynthesis in procaryotes. New genes and regulatory mechanisms

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

Regulation of bacterial gene expression by riboswitches

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

Gene regulation by riboswitches

7 April 2017

1 reference

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Site-specific modification of Shigella flexneri virF mRNA by tRNA-guanine transglycosylase in vitro

7 April 2017

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A computational pipeline for high- throughput discovery of cis-regulatory noncoding RNA in prokaryotes

28 September 2017

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Thermodynamic and kinetic characterization of ligand binding to the purine riboswitch aptamer domain

28 September 2017

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Genetic analysis identifies a function for the queC (ybaX) gene product at an initial step in the queuosine biosynthetic pathway in Escherichia coli

28 September 2017

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Riboswitches as versatile gene control elements

28 September 2017

1 reference

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An intermolecular base triple as the basis of ligand specificity and affinity in the guanine- and adenine-sensing riboswitch RNAs

28 September 2017

1 reference

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Riboswitches exert genetic control through metabolite-induced conformational change

28 September 2017

1 reference

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Comparative genomics of the vitamin B12 metabolism and regulation in prokaryotes.

28 September 2017

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Biosynthesis of the 7-deazaguanosine hypermodified nucleosides of transfer RNA.

28 September 2017

1 reference

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Transcription termination control of the S box system: direct measurement of S-adenosylmethionine by the leader RNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

Relationship between internucleotide linkage geometry and the stability of RNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

A new function of S-adenosylmethionine: the ribosyl moiety of AdoMet is the precursor of the cyclopentenediol moiety of the tRNA wobble base queuine

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

Possible anticodon sequences of tRNAHis, tRNAAsn, and tRNAAsp from Escherichia coli. Universal presence of nucleoside O in the first position of the anticodons of these transfer ribonucleic acid

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

Novel mechanism of post-transcriptional modification of tRNA. Insertion of bases of Q precursors into tRNA by a specific tRNA transglycosylase reaction

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

Lactobacillus plantarum ccl gene is non-essential, arginine-repressed and codes for a conserved protein in Firmicutes.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

Immobilized RNA switches for the analysis of complex chemical and biological mixtures

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

On the potential role of the amino nitrogen atom as a hydrogen bond acceptor in macromolecules.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2271366

A rapid method for the construction of synthetic genes using the polymerase chain reaction

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18305186

12 December 2020

inferred from PubMed ID database lookup

Wild-type tRNATyrG reads the TMV RNA stop codon, but Q base-modified tRNATyrQ does not.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18305186

12 December 2020

inferred from PubMed ID database lookup

Isolation and characterization of an Escherichia coli mutant lacking tRNA-guanine transglycosylase. Function and biosynthesis of queuosine in tRNA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18305186

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1261/RNA.937308

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18305186%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18305186%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

2 references