The lncRNA Malat1 is dispensable for mouse development but its transcription plays a cis-regulatory role in the adult (Q24628036)

GOA release 2020-03-11

Paraspeckle protein 1

1 reference

GOA release 2020-03-11

11

David L Spector

0 references

Yuntao S Mao

3

object named as

Yuntao S Mao

0 references

author name string

Bin Zhang

1

0 references

Gayatri Arun

2

0 references

Zsolt Lazar

4

0 references

Gene Hung

5

0 references

Gourab Bhattacharjee

6

0 references

Xiaokun Xiao

7

0 references

Carmen J Booth

8

0 references

Jie Wu

9

0 references

Chaolin Zhang

ncRNA- and Pc2 methylation-dependent gene relocation between nuclear structures mediates gene activation programs

10

0 references

language of work or name

English

0 references

publication date

26 July 2012

0 references

published in

Cell Reports

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volume

2

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page(s)

111-23

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issue

1

0 references

cites work

1 reference

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Direct visualization of the co-transcriptional assembly of a nuclear body by noncoding RNAs

7 April 2017

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The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation

7 April 2017

1 reference

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A long nuclear-retained non-coding RNA regulates synaptogenesis by modulating gene expression

7 April 2017

1 reference

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Long noncoding RNA as modular scaffold of histone modification complexes

7 April 2017

1 reference

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Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis

7 April 2017

1 reference

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Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA

7 April 2017

1 reference

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Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression

7 April 2017

1 reference

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An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

MENepsilon/beta noncoding RNAs are essential for structural integrity of nuclear paraspeckles

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

MEN epsilon/beta nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

3' end processing of a long nuclear-retained noncoding RNA yields a tRNA-like cytoplasmic RNA

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Domain-wide regulation of gene expression in the human genome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

A screen for nuclear transcripts identifies two linked noncoding RNAs associated with SC35 splicing domains

7 April 2017

1 reference

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Transcription of bxd noncoding RNAs promoted by trithorax represses Ubx in cis by transcriptional interference

7 April 2017

1 reference

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Transcriptional interference--a crash course

7 April 2017

1 reference

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Cloning of an Alpha-TFEB fusion in renal tumors harboring the t(6;11)(p21;q13) chromosome translocation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Intergenic transcription is required to repress the Saccharomyces cerevisiae SER3 gene

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Nuclear speckles: a model for nuclear organelles

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Antisense RNA stabilization induces transcriptional gene silencing via histone deacetylation in S. cerevisiae.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Kcnq1ot1 noncoding RNA mediates transcriptional gene silencing by interacting with Dnmt1

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

The non-coding Air RNA is required for silencing autosomal imprinted genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Long noncoding RNAs with enhancer-like function in human cells

7 April 2017

1 reference

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Long noncoding RNAs: functional surprises from the RNA world

7 April 2017

1 reference

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Genome-wide transcription and the implications for genomic organization

7 April 2017

1 reference

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MALAT-1, a novel noncoding RNA, and thymosin beta4 predict metastasis and survival in early-stage non-small cell lung cancer

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Nonimmunoglobulin target loci of activation-induced cytidine deaminase (AID) share unique features with immunoglobulin genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Single-cell analysis reveals that noncoding RNAs contribute to clonal heterogeneity by modulating transcription factor recruitment

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Targeted RNA sequencing reveals the deep complexity of the human transcriptome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

tRNAs marked with CCACCA are targeted for degradation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Structural and functional differences in the long non-coding RNA hotair in mouse and human

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Cell-specific occupancy of an extended repertoire of CREM and CREB binding loci in male germ cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Digital genome-wide ncRNA expression, including SnoRNAs, across 11 human tissues using polyA-neutral amplification

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Long noncoding RNA genes: conservation of sequence and brain expression among diverse amniotes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Lens epithelium-derived growth factor fusion proteins redirect HIV-1 DNA integration

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

A transcriptional sketch of a primary human breast cancer by 454 deep sequencing

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Stepwise chromatin remodelling by a cascade of transcription initiation of non-coding RNAs

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Chromatin architecture of the human genome: gene-rich domains are enriched in open chromatin fibers

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Antisense transcription controls cell fate in Saccharomyces cerevisiae

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

A ncRNA modulates histone modification and mRNA induction in the yeast GAL gene cluster

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3408587

Xist-deficient mice are defective in dosage compensation but not spermatogenesis

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22840402

12 December 2020

inferred from PubMed ID database lookup

DNA sequence of the translocation breakpoints in undifferentiated embryonal sarcoma arising in mesenchymal hamartoma of the liver harboring the t(11;19)(q11;q13.4) translocation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22840402

12 December 2020

inferred from PubMed ID database lookup

Identification of protein antigens associated with the nuclear matrix and with clusters of interchromatin granules in both interphase and mitotic cells

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22840402

12 December 2020

inferred from PubMed ID database lookup

Evolution of the Long Non-coding RNAs MALAT1 and MENβ/ε

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELREP.2012.06.003

7 January 2021

https://api.crossref.org/works/10.1016%2FJ.CELREP.2012.06.003

1 reference

7 January 2021

Improved northern blot method for enhanced detection of small RNA.

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELREP.2012.06.003

7 January 2021

Hybrid vigor, fetal overgrowth, and viability of mice derived by nuclear cloning and tetraploid embryo complementation

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELREP.2012.06.003

7 January 2021

Purification and biochemical characterization of interchromatin granule clusters

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELREP.2012.06.003

7 January 2021

Arginine methylation controls the subcellular localization and functions of the oncoprotein splicing factor SF2/ASF

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELREP.2012.06.003

7 January 2021

Aberrant eukaryotic translation initiation factor 4E-dependent mRNA transport impedes hematopoietic differentiation and contributes to leukemogenesis

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELREP.2012.06.003

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Mice lacking sister chromatid cohesion protein PDS5B exhibit developmental abnormalities reminiscent of Cornelia de Lange syndrome.

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELREP.2012.06.003

7 January 2021

10.1016/J.CELREP.2012.06.003

Identifiers

DOI

1 reference

1012798

1012798

1 reference

1 reference

1 reference