Mitochondrial DNA sequences reveal the photosynthetic relatives of Rafflesia, the world's largest flower (Q24627371)

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Seed plant phylogeny inferred from all three plant genomes: monophyly of extant gymnosperms and origin of Gnetales from conifers

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

MRBAYES: Bayesian inference of phylogenetic trees

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

MODELTEST: testing the model of DNA substitution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Molecular data place Hydnoraceae with Aristolochiaceae

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Evidence from beta-tubulin phylogeny that microsporidia evolved from within the fungi

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Horizontal gene transfer from flowering plants to Gnetum

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Independent and combined analyses of sequences from all three genomic compartments converge on the root of flowering plant phylogeny

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Confidence Limits on Phylogenies: an Approach using the Bootstrap

7 April 2017

1 reference

https://api.crossref.org/works/10.1073/PNAS.0305562101

Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

The earliest angiosperms: evidence from mitochondrial, plastid and nuclear genomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Angiosperm phylogeny inferred from multiple genes as a tool for comparative biology

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Monophyly of the Convolvulaceae and circumscription of their major lineages based on DNA sequences of multiple chloroplast loci

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Macromolecular trafficking between Nicotiana tabacum and the holoparasite Cuscuta reflexa

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Evolution of plastid gene rps2 in a lineage of hemiparasitic and holoparasitic plants: many losses of photosynthesis and complex patterns of rate variation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

High rates of nucleotide substitution in nuclear small-subunit (18S) rDNA from holoparasitic flowering plants

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

RNA editing of mat-r transcripts in maize and soybean increases similarity of the encoded protein to fungal and bryophyte group II intron maturases: evidence that mat-r encodes a functional protein

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Estimation of evolutionary distances between homologous nucleotide sequences

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Was the ANITA rooting of the angiosperm phylogeny affected by long-branch attraction? Amborella, Nymphaeales, Illiciales, Trimeniaceae, and Austrobaileya

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Effects of RNA editing and gene processing on phylogenetic reconstruction

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321759

Power analysis of tests for loss of selective constraint in cave crayfish and nonphotosynthetic plant lineages

30 May 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

Do nonasterid holoparasitic flowering plants have plastid genomes?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG II

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

Multigene analyses identify the three earliest lineages of extant flowering plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

Characterization of mitochondrial small-subunit ribosomal RNAs from holoparasitic plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

Phylogenetics of flowering plants based on combined analysis of plastid atpB and rbcL gene sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

Editing status of mat-r transcripts in mitochondria from two plant species: C-to-U changes occur in putative functional RT and maturase domains.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

Widespread horizontal transfer of mitochondrial genes in flowering plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

Toward a Phylogenetic Classification of the Lauraceae: Evidence from matK Sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

Loss of photosynthetic and chlororespiratory genes from the plastid genome of a parasitic flowering plant

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

Comparison of three methods for estimating internal support on phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101

A simulation study of reduced tree-search effort in bootstrap resampling analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0305562101