Proteomic analysis identifies a new complex required for nuclear pre-mRNA retention and splicing (Q24317157)

Gene Ontology release 2020-05-02

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U2 snRNP complex subunit HSH155 YMR288W

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U2 snRNP complex subunit IST3 YIR005W

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U2 snRNP complex subunit RDS3 YPR094W

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U2 snRNP complex subunit RSE1 YML049C

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U2 snRNP complex subunit YSF3 YNL138W-A

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U2 snRNP complex subunit HSH49 YOR319W

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Pml1p YLR016C

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Bud13p YGL174W

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U2 snRNP complex subunit CUS1 YMR240C

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author

Bertrand Séraphin

8

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Andrzej Dziembowski

1

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Céline Faux

5

object named as

Céline Faux

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author name string

Ana-Paula Ventura

2

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Berthold Rutz

3

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Friederike Caspary

4

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Frédéric Halgand

6

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Olivier Laprévote

Characterization of novel SF3b and 17S U2 snRNP proteins, including a human Prp5p homologue and an SF3b DEAD-box protein

7

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language of work or name

English

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publication date

8 December 2004

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published in

The EMBO Journal

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volume

23

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page(s)

4847-56

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issue

24

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cites work

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Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis

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A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site.

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Characterization of a protein complex containing spliceosomal proteins SAPs 49, 130, 145, and 155

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Partial purification of the yeast U2 snRNP reveals a novel yeast pre-mRNA splicing factor required for pre-spliceosome assembly

19 March 2017

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Evidence that sequence-independent binding of highly conserved U2 snRNP proteins upstream of the branch site is required for assembly of spliceosomal complex A

19 March 2017

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Nuclear retention of unspliced mRNAs in yeast is mediated by perinuclear Mlp1.

19 March 2017

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Global analysis of protein expression in yeast

19 March 2017

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Rds3p Is Required for Stable U2 snRNP Recruitment to the Splicing Apparatus

19 March 2017

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Spatial organization of protein-RNA interactions in the branch site-3' splice site region during pre-mRNA splicing in yeast

19 March 2017

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Molecular Architecture of the Multiprotein Splicing Factor SF3b

19 March 2017

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Composition and functional characterization of the yeast spliceosomal penta-snRNP.

19 March 2017

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A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae

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A novel yeast U2 snRNP protein, Snu17p, is required for the first catalytic step of splicing and for progression of spliceosome assembly

19 March 2017

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In vivo commitment to splicing in yeast involves the nucleotide upstream from the branch site conserved sequence and the Mud2 protein

19 March 2017

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Identification and characterization of a yeast gene encoding the U2 small nuclear ribonucleoprotein particle B" protein

19 March 2017

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CUS1, a suppressor of cold-sensitive U2 snRNA mutations, is a novel yeast splicing factor homologous to human SAP 145.

19 March 2017

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Allosteric cascade of spliceosome activation

19 March 2017

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Heterologous HIS3 marker and GFP reporter modules for PCR-targeting in Saccharomyces cerevisiae

7 April 2017

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The structure and function of proteins involved in mammalian pre-mRNA splicing

7 April 2017

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Sm and Sm-like proteins belong to a large family: identification of proteins of the U6 as well as the U1, U2, U4 and U5 snRNPs

7 April 2017

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Interactions between small nuclear ribonucleoprotein particles in formation of spliceosomes

7 April 2017

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Identification of functional U1 snRNA-pre-mRNA complexes committed to spliceosome assembly and splicing

7 April 2017

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What does it mean to identify a protein in proteomics?

7 April 2017

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Perspectives for mass spectrometry and functional proteomics

27 September 2017

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Proteomics to study genes and genomes

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27 September 2017

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A minimal spliceosomal complex A recognizes the branch site and polypyrimidine tract

27 September 2017

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Three recognition events at the branch-site adenine.

27 September 2017

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Direct interactions between pre-mRNA and six U2 small nuclear ribonucleoproteins during spliceosome assembly

27 September 2017

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A U1 snRNA:pre-mRNA base pairing interaction is required early in yeast spliceosome assembly but does not uniquely define the 5' cleavage site.

27 September 2017

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Structure of spliceosomal snRNPs and their role in pre-mRNA splicing

27 September 2017

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The yeast branchpoint sequence is not required for the formation of a stable U1 snRNA-pre-mRNA complex and is recognized in the absence of U2 snRNA.

27 September 2017

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Recognition of the TACTAAC box during mRNA splicing in yeast involves base pairing to the U2-like snRNA.

27 September 2017

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Identification of both shared and distinct proteins in the major and minor spliceosomes

27 September 2017

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Mutations in U6 snRNA that alter splice site specificity: implications for the active site

30 May 2018

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Electrophoresis of ribonucleoproteins reveals an ordered assembly pathway of yeast splicing complexes

30 May 2018

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An ATP-independent complex commits pre-mRNA to the mammalian spliceosome assembly pathway

30 May 2018

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30 May 2018

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Crossref

https://api.crossref.org/works/10.1038%2FSJ.EMBOJ.7600482

A quantitative analysis of the effects of 5′ junction and TACTAAC box mutants and mutant combinations on yeast mRNA splicing

21 January 2018

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Crossref

https://api.crossref.org/works/10.1038%2FSJ.EMBOJ.7600482

New constructs and strategies for efficient PCR-based gene manipulations in yeast.

21 January 2018

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U5 snRNA interacts with exon sequences at 5′ and 3′ splice sites

29 November 2018

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12 December 2020

Separation of splicing factor SF3 into two components and purification of SF3a activity

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12 December 2020

Site-specific cross-linking of mammalian U5 snRNP to the 5' splice site before the first step of pre-mRNA splicing

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12 December 2020

Involvement of U6 snRNA in 5' splice site selection

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12 December 2020

FHA domain boundaries of the Dun1p and Rad53p cell cycle checkpoint kinases

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12 December 2020

Some cis- and trans-acting mutants for splicing target pre-mRNA to the cytoplasm

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12 December 2020

Mutational analysis of the interactions between U1 small nuclear RNA and pre-mRNA of yeast

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12 December 2020

Identifiers

DOI

10.1038/SJ.EMBOJ.7600482

1 reference

1056148

1056148

1 reference

1 reference

1 reference