ATP is required for interactions between UAP56 and two conserved mRNA export proteins, Aly and CIP29, to assemble the TREX complex (Q24299834)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

title

ATP is required for interactions between UAP56 and two conserved mRNA export proteins, Aly and CIP29, to assemble the TREX complex (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

SAP domain containing ribonucleoprotein

13 February 2020

main subject

1 reference

DNA polymerase delta interacting protein 3

1 reference

DExD-box helicase 39A

1 reference

DExD-box helicase 39B

1 reference

protein-containing complex binding

1 reference

author

Stuart A Wilson

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

4

Steven P Gygi

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

author name string

Kobina Dufu

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Michaela J Livingstone

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Jan Seebacher

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Robin Reed

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

language of work or name

English

0 references

publication date

1 September 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

volume

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

page(s)

2043-2053

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

issue

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

UIF, a New mRNA export adaptor that works together with REF/ALY, requires FACT for recruitment to mRNA

13 February 2020

cites work

1 reference

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Ars2 links the nuclear cap-binding complex to RNA interference and cell proliferation

19 March 2017

1 reference

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Topology and regulation of the human eIF4A/4G/4H helicase complex in translation initiation

19 March 2017

1 reference

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Distinct activities of the DExD/H-box splicing factor hUAP56 facilitate stepwise assembly of the spliceosome

19 March 2017

1 reference

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SKAR links pre-mRNA splicing to mTOR/S6K1-mediated enhanced translation efficiency of spliced mRNAs

19 March 2017

1 reference

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Human mRNA export machinery recruited to the 5' end of mRNA

19 March 2017

1 reference

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Molecular basis of RNA recognition and TAP binding by the SR proteins SRp20 and 9G8

19 March 2017

1 reference

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Recruitment of the human TREX complex to mRNA during splicing

19 March 2017

1 reference

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A nuclear translation-like factor eIF4AIII is recruited to the mRNA during splicing and functions in nonsense-mediated decay

19 March 2017

1 reference

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Analysis of a high-throughput yeast two-hybrid system and its use to predict the function of intracellular proteins encoded within the human MHC class III region

19 March 2017

1 reference

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An integrated approach in the discovery and characterization of a novel nuclear protein over-expressed in liver and pancreatic tumors

19 March 2017

1 reference

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Functional association of U2 snRNP with the ATP-independent spliceosomal complex E

19 March 2017

1 reference

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Human homologs of yeast prp16 and prp17 reveal conservation of the mechanism for catalytic step II of pre-mRNA splicing

19 March 2017

1 reference

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Tho1, a novel hnRNP, and Sub2 provide alternative pathways for mRNP biogenesis in yeast THO mutants

19 March 2017

1 reference

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A novel yeast gene, THO2, is involved in RNA pol II transcription and provides new evidence for transcriptional elongation-associated recombination.

19 March 2017

1 reference

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The spliceosome: design principles of a dynamic RNP machine

19 March 2017

1 reference

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Exporting RNA from the nucleus to the cytoplasm

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

Pre-mRNA splicing and mRNA export linked by direct interactions between UAP56 and Aly

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

SAP - a putative DNA-binding motif involved in chromosomal organization

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

Correlation between protein and mRNA abundance in yeast

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

U2AF65 recruits a novel human DEAD box protein required for the U2 snRNP-branchpoint interaction

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

ALY, a context-dependent coactivator of LEF-1 and AML-1, is required for TCRalpha enhancer function

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

HIV-1 structural gene expression requires the binding of multiple Rev monomers to the viral RRE: implications for HIV-1 latency

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

Pre-mRNA processing reaches back to transcription and ahead to translation

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

The protein Aly links pre-messenger-RNA splicing to nuclear export in metazoans

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

Intracellular characterization of DDX39, a novel growth-associated RNA helicase

7 April 2017

1 reference

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Human enhancer of rudimentary is a molecular partner of PDIP46/SKAR, a protein interacting with DNA polymerase delta and S6K1 and regulating cell growth

27 September 2017

1 reference

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Nuclear localization of poly(A)+ mRNA following siRNA reduction of expression of the mammalian RNA helicases UAP56 and URH49.

27 September 2017

1 reference

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Mutations in tap uncouple RNA export activity from translocation through the nuclear pore complex

27 September 2017

1 reference

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Cotranscriptional mRNP assembly: from the DNA to the nuclear pore

27 September 2017

1 reference

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Hcc-1 is a novel component of the nuclear matrix with growth inhibitory function

27 September 2017

1 reference

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RanBP2/Nup358 provides a major binding site for NXF1-p15 dimers at the nuclear pore complex and functions in nuclear mRNA export.

27 September 2017

1 reference

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Cloning and characterization of a proliferation-associated cytokine-inducible protein, CIP29.

27 September 2017

1 reference

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A conserved mRNA export machinery coupled to pre-mRNA splicing

27 September 2017

1 reference

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Quality control of mRNA function

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

Protein composition of human mRNPs spliced in vitro and differential requirements for mRNP protein recruitment

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

Cotranscriptional recruitment of the mRNA export factor Yra1 by direct interaction with the 3' end processing factor Pcf11.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

ATP-dependent recruitment of export factor Aly/REF onto intronless mRNAs by RNA helicase UAP56

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

The prototype gamma-2 herpesvirus nucleocytoplasmic shuttling protein, ORF 57, transports viral RNA through the cellular mRNA export pathway

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

A novel partner gene CIP29 containing a SAP domain with MLL identified in infantile myelomonocytic leukemia.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

Genome-wide analysis of mRNAs regulated by the THO complex in Drosophila melanogaster.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

Mechanism of loading the Escherichia coli DNA polymerase III sliding clamp: II. Uncoupling the beta and DNA binding activities of the gamma complex

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

The DExH/D box protein HEL/UAP56 is essential for mRNA nuclear export in Drosophila

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939366

Excess beta subunit can bypass the ATP requirement for highly processive synthesis by the Escherichia coli DNA polymerase III holoenzyme

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20844015

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Normal and mutant human β-globin pre-mRNAs are faithfully and efficiently spliced in vitro

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20844015

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GAD.1898610

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20844015%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

2 references