BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions (Q21284353)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20426874%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

title

BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20426874%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

0 references

1 reference

2

Junyoung O Park

Junyoung O

Park

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20426874%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

4

Bernhard Ø Palsson

Bernhard Ø

Palsson

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20426874%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Jan Schellenberger

1

Jan

Schellenberger

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20426874%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Tom M Conrad

series ordinal

3

author given names

Tom M

author last names

Conrad

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20426874%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

language of work or name

English

0 references

publication date

29 April 2010

1 reference

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1 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20426874%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

volume

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20426874%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

page(s)

213

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20426874%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1186/1471-2105-11-213

1 February 2020

issue

1

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exact match

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cites work

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19 March 2017

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Expansion of the BioCyc collection of pathway/genome databases to 160 genomes

19 March 2017

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Modeling Lactococcus lactis using a genome-scale flux model

19 March 2017

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Genome-scale reconstruction of the metabolic network in Staphylococcus aureus N315: an initial draft to the two-dimensional annotation

19 March 2017

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Entrez Gene: gene-centered information at NCBI

19 March 2017

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Reactome: a knowledgebase of biological pathways

19 March 2017

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The Universal Protein Resource (UniProt)

19 March 2017

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BRENDA, the enzyme database: updates and major new developments

19 March 2017

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19 March 2017

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An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

12 September 2017

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KEGG: Kyoto Encyclopedia of Genes and Genomes

19 March 2017

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The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

19 March 2017

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Analysis of optimality in natural and perturbed metabolic networks

19 March 2017

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The Pathway Tools software

19 March 2017

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19 March 2017

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A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information

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12 September 2017

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The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli

12 September 2017

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Analysis of Aspergillus nidulans metabolism at the genome-scale

12 September 2017

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Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa PAO1

12 September 2017

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12 September 2017

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Toward the automated generation of genome-scale metabolic networks in the SEED.

12 September 2017

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12 September 2017

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Modeling methanogenesis with a genome-scale metabolic reconstruction of Methanosarcina barkeri

12 September 2017

1 reference

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12 September 2017

1 reference

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Expanded metabolic reconstruction of Helicobacter pylori (iIT341 GSM/GPR): an in silico genome-scale characterization of single- and double-deletion mutants

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2874806

k-Cone analysis: determining all candidate values for kinetic parameters on a network scale

12 September 2017

1 reference

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Reconstruction and validation of Saccharomyces cerevisiae iND750, a fully compartmentalized genome-scale metabolic model

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2874806

Analyzing cellular biochemistry in terms of molecular networks

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2874806

Expansion of the kinetic model of differentiation in Dictyostelium discoideum

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2874806

E-CELL: software environment for whole-cell simulation

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2874806

Systems properties of the Haemophilus influenzae Rd metabolic genotype

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2874806

Linear theory of enzymatic chains; its application for the analysis of the crossover theorem and of the glycolysis of human erythrocytes.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2874806

A kinetic model for the interaction of energy metabolism and osmotic states of human erythrocytes. Analysis of the stationary "in vivo" state and of time dependent variations under blood preservation conditions.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2874806

Reconstruction, modeling & analysis of Halobacterium salinarum R-1 metabolism

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2874806

SmartCell, a framework to simulate cellular processes that combines stochastic approximation with diffusion and localisation: analysis of simple networks.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2874806

Challenges to be faced in the reconstruction of metabolic networks from public databases.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2874806

In silico design and adaptive evolution of Escherichia coli for production of lactic acid.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2874806

[H-Invitational Database: integrated database of human genes]

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20426874

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-11-213

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20426874%20AND%20SRC:MED&resulttype=core&format=json

journals/bmcbi/SchellenbergerPCP10

1 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1037674885

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20426874%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

2 references