Endogenous mammalian histone H3.3 exhibits chromatin-related functions during development (Q21198852)

GOA release 2020-03-11

Kelly M Bush

1

Kelly M

Bush

1 reference

18 August 2022

Benjamin Tk Yuen

2

Benjamin TK

Yuen

1 reference

18 August 2022

Bonnie L Barrilleaux

3

Bonnie L

Barrilleaux

1 reference

18 August 2022

John W Riggs

4

John W

Riggs

1 reference

18 August 2022

Henriette O'Geen

5

Henriette

O’Geen

1 reference

18 August 2022

Rebecca F Cotterman

6

Rebecca F

Cotterman

1 reference

18 August 2022

Paul S Knoepfler

7

Paul S

Knoepfler

1 reference

describes a project that uses

18 August 2022

language of work or name

English

0 references

publication date

2013

0 references

published in

Epigenetics & Chromatin

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volume

6

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issue

1

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page(s)

7

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ImageJ

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3635903/fullTextXML

inferred from PubMed Central ID database lookup

edgeR

object named as

edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

ggplot2

object named as

R package ggplot2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1756-8935-6-7

0 references

cites work

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Daxx is an H3.3-specific histone chaperone and cooperates with ATRX in replication-independent chromatin assembly at telomeres

19 March 2017

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The death-associated protein DAXX is a novel histone chaperone involved in the replication-independent deposition of H3.3

19 March 2017

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H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions

19 March 2017

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Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis

19 March 2017

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19 March 2017

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ATRX interacts with H3.3 in maintaining telomere structural integrity in pluripotent embryonic stem cells

19 March 2017

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Distinct factors control histone variant H3.3 localization at specific genomic regions

19 March 2017

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The mitotic-to-endocycle switch in Drosophila follicle cells is executed by Notch-dependent regulation of G1/S, G2/M and M/G1 cell-cycle transitions

19 March 2017

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Heterochromatin formation in the mouse embryo requires critical residues of the histone variant H3.3

19 March 2017

1 reference

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A map of the cis-regulatory sequences in the mouse genome

19 March 2017

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Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma

7 April 2017

1 reference

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The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly

7 April 2017

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Inhibition of PRC2 activity by a gain-of-function H3 mutation found in pediatric glioblastoma

7 April 2017

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DAXX-dependent supply of soluble (H3.3-H4) dimers to PML bodies pending deposition into chromatin

12 September 2017

1 reference

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Nucleosome-depleted chromatin gaps recruit assembly factors for the H3.3 histone variant

12 September 2017

1 reference

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An essential role of variant histone H3.3 for ectomesenchyme potential of the cranial neural crest

12 September 2017

1 reference

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Transcriptional amplification in tumor cells with elevated c-Myc.

12 September 2017

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Using ChIP-seq technology to generate high-resolution profiles of histone modifications

12 September 2017

1 reference

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H3.3 is deposited at centromeres in S phase as a placeholder for newly assembled CENP-A in G₁ phase

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Chromatin environment of histone variant H3.3 revealed by quantitative imaging and genome-scale chromatin and DNA immunoprecipitation.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Epigenetic inheritance during the cell cycle

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Mouse embryonic fibroblasts null for the Krüppel-like factor 4 gene are genetically unstable

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Proliferation-dependent and cell cycle regulated transcription of mouse pericentric heterochromatin

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Histone replacement marks the boundaries of cis-regulatory domains

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Drosophila GAGA factor directs histone H3.3 replacement that prevents the heterochromatin spreading

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Accumulation of small murine minor satellite transcripts leads to impaired centromeric architecture and function

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Serine 31 phosphorylation of histone variant H3.3 is specific to regions bordering centromeres in metaphase chromosomes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Histone H3.3 is enriched in covalent modifications associated with active chromatin

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Heterochromatic deposition of centromeric histone H3-like proteins

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Differential expression of the murine histone genes H3.3A and H3.3B.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

The terminal telomeric DNA sequence determines the mechanism of dysfunctional telomere fusion

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

HIRA dependent H3.3 deposition is required for transcriptional reprogramming following nuclear transfer to Xenopus oocytes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Histone H1 binding is inhibited by histone variant H3.3.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Transcriptional and developmental functions of the H3.3 histone variant in Drosophila

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Transcriptional activation triggers deposition and removal of the histone variant H3.3.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Zp3-cre, a transgenic mouse line for the activation or inactivation of loxP-flanked target genes specifically in the female germ line

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Conditional allelic replacement applied to genes encoding the histone variant H3.3 in the mouse.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Hotspot mutations in H3F3A and IDH1 define distinct epigenetic and biological subgroups of glioblastoma.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

A developmental requirement for HIRA-dependent H3.3 deposition revealed at gastrulation in Xenopus.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Dynamics of histone H3 deposition in vivo reveal a nucleosome gap-filling mechanism for H3.3 to maintain chromatin integrity.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Transcription in the absence of histone H3.3.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Differential expression of human replacement and cell cycle dependent H3 histone genes

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

Higher-order structure in pericentric heterochromatin involves a distinct pattern of histone modification and an RNA component

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

A retroviral gene trap insertion into the histone 3.3A gene causes partial neonatal lethality, stunted growth, neuromuscular deficits and male sub-fertility in transgenic mice.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635903

HIRA Is Critical for a Nucleosome Assembly Pathway Independent of DNA Synthesis

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23570311

12 December 2020

inferred from PubMed ID database lookup

Somatic mutation of H3F3A, a chromatin remodeling gene, is rare in acute leukemias and non-Hodgkin lymphoma

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23570311

12 December 2020

inferred from PubMed ID database lookup

Patterns of histone variant synthesis can distinguish G0 from G1 cells

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23570311

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1186/1756-8935-6-7

1 reference

3697571

release_cborxwkxe5bexchr33kh467d5e

0 references

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/cborxwkxe5bexchr33kh467d5e

24 November 2022

mapped directly with Wikidata item

3697571

1 reference

1 reference

1 reference