Between a chicken and a grape: estimating the number of human genes (Q21184037)

Europe PubMed Central

title

Between a chicken and a grape: estimating the number of human genes (English)

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Steven L Salzberg

2

Steven L

Salzberg

1 reference

Dimensions Publication ID

Dimensions

17 August 2022

1

Mihaela Pertea

Mihaela

Pertea

1 reference

Dimensions Publication ID

Dimensions

1042136844

https://scigraph.springernature.com/pub.10.1186/gb-2010-11-5-206

17 August 2022

language of work or name

English

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publication date

2010

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published in

Genome Biology

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volume

11

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issue

5

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page(s)

206

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exact match

0 references

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Recent de novo origin of human protein-coding genes

19 March 2017

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The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes

19 March 2017

1 reference

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CONTRAST: a discriminative, phylogeny-free approach to multiple informant de novo gene prediction

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Distinguishing protein-coding and noncoding genes in the human genome

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Initial sequencing and analysis of the human genome

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Spliced segments at the 5′ terminus of adenovirus 2 late mRNA

19 March 2017

1 reference

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The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

19 March 2017

1 reference

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Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

19 March 2017

1 reference

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The origin of new genes: glimpses from the young and old

19 March 2017

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The Sequence of the Human Genome

19 March 2017

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Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Prediction of complete gene structures in human genomic DNA

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14

19 March 2017

1 reference

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Detection of large-scale variation in the human genome

19 March 2017

1 reference

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Large-scale copy number polymorphism in the human genome

19 March 2017

1 reference

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A Gene Map of the Human Genome

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

The ENCODE (ENCyclopedia Of DNA Elements) Project

19 March 2017

1 reference

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NCBI Reference Sequences: current status, policy and new initiatives

7 April 2017

1 reference

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Complementary DNA sequencing: expressed sequence tags and human genome project

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Building the sequence map of the human pan-genome

7 April 2017

1 reference

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12 September 2017

The UCSC Genome Browser

1 reference

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The completion of the Mammalian Gene Collection (MGC).

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Personalized copy number and segmental duplication maps using next-generation sequencing.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Identifying protein-coding genes in genomic sequences

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Steady progress and recent breakthroughs in the accuracy of automated genome annotation

12 September 2017

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Targeted discovery of novel human exons by comparative genomics

12 September 2017

1 reference

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JIGSAW, GeneZilla, and GlimmerHMM: puzzling out the features of human genes in the ENCODE regions

12 September 2017

1 reference

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Prediction of genomic functional elements.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Estimate of human gene number provided by genome-wide analysis using Tetraodon nigroviridis DNA sequence

12 September 2017

1 reference

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Analysis of expressed sequence tags indicates 35,000 human genes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Number of CpG islands and genes in human and mouse

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Recognition of protein coding regions in DNA sequences

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

An amazing sequence arrangement at the 5' ends of adenovirus 2 messenger RNA.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

JIGSAW: integration of multiple sources of evidence for gene prediction

12 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Integrating genomic homology into gene structure prediction.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Computational methods for the identification of genes in vertebrate genomic sequences.

30 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

Gene index analysis of the human genome estimates approximately 120,000 genes.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898077

The coding function of nucleotide sequences can be discerned by statistical analysis

29 November 2018

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12 December 2020

How many genes in the human genome?

1 reference

12 December 2020

Predicting the total number of human genes

1 reference

12 December 2020

A big book of the human genome

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12 December 2020

A Preliminary Estimate of the Number of Human Genes

1 reference

12 December 2020

Human genome: end of the beginning

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12 December 2020

Identifiers

DOI

10.1186/GB-2010-11-5-206

1 reference

Dimensions Publication ID

2798881

1042136844

0 references

2798881

1 reference

1 reference

1 reference