Lineage-specific biology revealed by a finished genome assembly of the mouse (Q21145823)

16 August 2022

12

Yuri Kapustin

Yuri

Kapustin

1 reference

16 August 2022

10

Michael DiCuccio

Michael

DiCuccio

1 reference

16 August 2022

17

Tina Graves

Tina

Graves

1 reference

16 August 2022

30

Evan E Eichler

Evan E

Eichler

1 reference

16 August 2022

2

Leo Goodstadt

Leo

Goodstadt

1 reference

16 August 2022

31

Chris P Ponting

Chris P

Ponting

1 reference

16 August 2022

James Amos-Landgraf

26

James

Amos-Landgraf

1 reference

16 August 2022

Ana C Marques

16

Ana C

Marques

1 reference

16 August 2022

4

Michael C Zody

Michael C

Zody

1 reference

16 August 2022

1

Deanna M Church

Deanna M

Church

1 reference

16 August 2022

7

Carol J Bult

Carol J

Bult

1 reference

16 August 2022

14

Donna Maglott

Donna

Maglott

1 reference

16 August 2022

3

Ladeana W

Hillier

Ladeana W Hillier

1 reference

16 August 2022

Konstantinos Potamousis

20

object named as

Konstantinos Potamousis

Konstantinos

Potamousis

1 reference

16 August 2022

Steve Goldstein

5

Steve

Goldstein

1 reference

16 August 2022

Xinwe She

6

Xinwe

She

1 reference

16 August 2022

Richa Agarwala

8

Richa

Agarwala

1 reference

16 August 2022

Joshua L Cherry

9

Joshua L

Cherry

1 reference

16 August 2022

Wratko Hlavina

11

Wratko

Hlavina

1 reference

16 August 2022

Peter Meric

13

Peter

Meric

1 reference

16 August 2022

Zoë Birtle

15

Zoë

Birtle

1 reference

16 August 2022

Shiguo Zhou

18

Shiguo

Zhou

1 reference

16 August 2022

Brian Teague

19

Brian

Teague

1 reference

16 August 2022

Christopher Churas

21

Christopher

Churas

1 reference

16 August 2022

Michael Place

22

Michael

Place

1 reference

16 August 2022

Jill Herschleb

23

Jill

Herschleb

1 reference

16 August 2022

Ron Runnheim

24

Ron

Runnheim

1 reference

16 August 2022

Daniel Forrest

25

Daniel

Forrest

1 reference

16 August 2022

David C Schwartz

27

David C

Schwartz

1 reference

16 August 2022

Ze Cheng

28

Ze

Cheng

1 reference

Creative Commons CC0 License

16 August 2022

language of work or name

English

0 references

publication date

5 May 2009

0 references

published in

PLOS Biology

0 references

volume

7

0 references

issue

5

0 references

page(s)

e1000112

0 references

copyright license

start time

26 May 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

cites work

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19 March 2017

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Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs

19 March 2017

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Using genomic data to unravel the root of the placental mammal phylogeny

19 March 2017

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19 March 2017

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Retroviral elements and their hosts: insertional mutagenesis in the mouse germ line

19 March 2017

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Duplication and positive selection among hominin-specific PRAME genes

19 March 2017

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The DNA sequence of the human X chromosome

19 March 2017

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Evolutionary conservation and selection of human disease gene orthologs in the rat and mouse genomes

19 March 2017

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Relaxed selective pressure on an essential component of pheromone transduction in primate evolution

19 March 2017

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The olfactory receptor gene repertoire in primates and mouse: evidence for reduction of the functional fraction in primates

19 March 2017

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Unusually rapid evolution of Neuroligin-4 in mice

19 March 2017

1 reference

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Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

19 March 2017

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Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

19 March 2017

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Genome sequence, comparative analysis and haplotype structure of the domestic dog

19 March 2017

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Comparing the human and chimpanzee genomes: Searching for needles in a haystack

19 March 2017

1 reference

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Initial sequence of the chimpanzee genome and comparison with the human genome

19 March 2017

1 reference

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Finishing the euchromatic sequence of the human genome

19 March 2017

1 reference

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Genome sequence of the Brown Norway rat yields insights into mammalian evolution

19 March 2017

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Initial sequencing and comparative analysis of the mouse genome

19 March 2017

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The Sequence of the Human Genome

19 March 2017

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Basic local alignment search tool

19 March 2017

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The transcriptional landscape of the mammalian genome

19 March 2017

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Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

19 March 2017

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Real-time DNA sequencing from single polymerase molecules

19 March 2017

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The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes

19 March 2017

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Comparison of the genomes of human and mouse lays the foundation of genome zoology

19 March 2017

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Reduced purifying selection prevails over positive selection in human copy number variant evolution

19 March 2017

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Rapid bursts of androgen-binding protein (Abp) gene duplication occurred independently in diverse mammals

19 March 2017

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Expression analysis of the mouse multi-copy X-linked gene Xlr-related, meiosis-regulated (Xmr), reveals that Xmr encodes a spermatid-expressed cytoplasmic protein, SLX/XMR

19 March 2017

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Complementary DNA cloning of rat spetex-1, a spermatid-expressing gene-1, encoding a 63 kDa cytoplasmic protein of elongate spermatids

19 March 2017

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SPEER--a new family of testis-specific genes from the mouse

19 March 2017

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Spindlin, a major maternal transcript expressed in the mouse during the transition from oocyte to embryo

19 March 2017

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Recent segmental duplications in the human genome

19 March 2017

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The genomic architecture of segmental duplications and associated copy number variants in dogs

7 April 2017

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12 September 2017

Mouse phenome database

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Mouse segmental duplication and copy number variation

12 September 2017

1 reference

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The mouse X chromosome is enriched for multicopy testis genes showing postmeiotic expression

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Quiet mutations in inbred strains of mice

12 September 2017

1 reference

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Takusan: a large gene family that regulates synaptic activity

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

An analysis of the gene complement of a marsupial, Monodelphis domestica: evolution of lineage-specific genes and giant chromosomes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Phylogenetic reconstruction of orthology, paralogy, and conserved synteny for dog and human

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

A murine specific expansion of the Rhox cluster involved in embryonic stem cell biology is under natural selection

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Primate segmental duplications: crucibles of evolution, diversity and disease

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

WindowMasker: window-based masker for sequenced genomes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Divergent V1R repertoires in five species: Amplification in rodents, decimation in primates, and a surprisingly small repertoire in dogs

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Comparative evolutionary genomics of androgen-binding protein genes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Analysis of segmental duplications and genome assembly in the mouse

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Identification of a new expanding family of genes characterized by atypical LRR domains. Localization of a cluster preferentially expressed in oocyte

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Human reproduction: a comparative background for medical hypotheses

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

A physical map of the mouse genome

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

A short pseudoautosomal region in laboratory mice

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Mouse-based phenogenomics for modelling human disease.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Capitalizing on large-scale mouse mutagenesis screens

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Structural variation of the pseudoautosomal region between and within inbred mouse strains.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

The gene encoding a major component of the lateral elements of synaptonemal complexes of the rat is related to X-linked lymphocyte-regulated genes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

A burst of segmental duplications in the genome of the African great ape ancestor

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Cloning and expression of the mouse pseudoautosomal steroid sulphatase gene (Sts).

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Enrichment of segmental duplications in regions of breaks of synteny between the human and mouse genomes suggest their involvement in evolutionary rearrangements

30 May 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000112

A new mouse model for autosomal recessive polycystic kidney disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000112

A protein encoded by a member of the multicopy Ssty gene family located on the long arm of the mouse Y chromosome is expressed during sperm development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000112

The Relative Rates of Evolution of Sex Chromosomes and Autosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000112

Deletions on mouse Yq lead to upregulation of multiple X- and Y-linked transcripts in spermatids

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000112

A comprehensive genetic map of the mouse genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000112

A microfluidic system for large DNA molecule arrays.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000112

Alignment of optical maps.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000112

A radiation hybrid map of mouse genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000112

Identification of three novel mutations in the KAL1 gene in patients with Kallmann syndrome

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680341

Shotgun sequence assembly and recent segmental duplications within the human genome

29 November 2018

1 reference

12 December 2020

A rhesus macaque radiation hybrid map and comparative analysis with the human genome

1 reference

12 December 2020

A new partner for the international knockout mouse consortium

1 reference

12 December 2020

Retrotransposons as epigenetic mediators of phenotypic variation in mammals

1 reference

12 December 2020

10.1371/JOURNAL.PBIO.1000112

Identifiers

DOI

1 reference

1 reference

1 reference

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