NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail (Q21145335)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

title

NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

1

Padraig Gleeson

Padraig

Gleeson

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

6

Matteo Farinella

Matteo

Farinella

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

8

Andrew P Davison

Andrew P

Davison

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

9

Subhasis Ray

Subhasis

Ray

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

13

R Angus Silver

R Angus

Silver

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

Sharon Crook

2

Sharon

Crook

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

Robert C Cannon

3

Robert C

Cannon

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

Michael L Hines

4

Michael L

Hines

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

Guy O Billings

5

Guy O

Billings

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

Thomas M Morse

7

Thomas M

Morse

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

Upinder S Bhalla

10

Upinder S

Bhalla

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

Simon R Barnes

11

Simon R

Barnes

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

Yoana D Dimitrova

12

Yoana D

Dimitrova

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

language of work or name

English

0 references

publication date

17 June 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

PLOS Computational Biology

6 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

volume

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

page(s)

e1000815

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

6 February 2020

copyright license

start time

17 June 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Neuron

object named as

NEURON

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

Neuron

0 references

cites work

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19 March 2017

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Terminology for neuroscience data discovery: multi-tree syntax and investigator-derived semantics

19 March 2017

1 reference

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neuroConstruct: a tool for modeling networks of neurons in 3D space

19 March 2017

1 reference

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BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems

19 March 2017

1 reference

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Towards NeuroML: model description methods for collaborative modelling in neuroscience

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Common data model for neuroscience data and data model exchange

19 March 2017

1 reference

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CellML: its future, present and past

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Model of cellular and network mechanisms for odor-evoked temporal patterning in the locust antennal lobe

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Why are computational neuroscience and systems biology so separate?

19 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

19 March 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Systems biology: a brief overview

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

A framework for modeling the growth and development of neurons and networks.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

PyNN: A Common Interface for Neuronal Network Simulators

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

PyMOOSE: Interoperable Scripting in Python for MOOSE.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Action potential generation requires a high sodium channel density in the axon initial segment

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Interoperability of neuroscience modeling software: current status and future directions

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

MorphML: level 1 of the NeuroML standards for neuronal morphology data and model specification.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

NeuroMorpho.Org: a central resource for neuronal morphologies.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Simulation of networks of spiking neurons: a review of tools and strategies

12 September 2017

1 reference

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Biological pattern generation: the cellular and computational logic of networks in motion

12 September 2017

1 reference

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Modeling single-neuron dynamics and computations: a balance of detail and abstraction

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Signal propagation in oblique dendrites of CA1 pyramidal cells

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

A role for fast rhythmic bursting neurons in cortical gamma oscillations in vitro.

12 September 2017

1 reference

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Fast synaptic inhibition promotes synchronized gamma oscillations in hippocampal interneuron networks

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Competitive Hebbian learning through spike-timing-dependent synaptic plasticity

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Expanding NEURON's repertoire of mechanisms with NMODL.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Increased pyramidal excitability and NMDA conductance can explain posttraumatic epileptogenesis without disinhibition: a model

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Synaptic depression enables neuronal gain control

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Computational reconstruction of pacemaking and intrinsic electroresponsiveness in cerebellar Golgi cells

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

ModelDB: A Database to Support Computational Neuroscience

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Dendrodendritic Inhibition and Simulated Odor Responses in a Detailed Olfactory Bulb Network Model

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Decoding temporal information: A model based on short-term synaptic plasticity.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Synchrony generation in recurrent networks with frequency-dependent synapses.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

An active membrane model of the cerebellar Purkinje cell. I. Simulation of current clamps in slice.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Influence of dendritic structure on firing pattern in model neocortical neurons.

30 May 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000815

Conditional dendritic spike propagation following distal synaptic activation of hippocampal CA1 pyramidal neurons.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000815

Arithmetic of subthreshold synaptic summation in a model CA1 pyramidal cell

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000815

Single-column thalamocortical network model exhibiting gamma oscillations, sleep spindles, and epileptogenic bursts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000815

Encoding and retrieval in the CA3 region of the hippocampus: a model of theta-phase separation

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000815

Role of mossy fiber sprouting and mossy cell loss in hyperexcitability: a network model of the dentate gyrus incorporating cell types and axonal topography

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000815

Synchronization of golgi and granule cell firing in a detailed network model of the cerebellar granule cell layer.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2887454

Synaptic integration in a model of cerebellar granule cells

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20585541

12 December 2020

inferred from PubMed ID database lookup

1 reference

https://pubmed.ncbi.nlm.nih.gov/20585541

12 December 2020

inferred from PubMed ID database lookup

NEST (NEural Simulation Tool)

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000815

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1371/JOURNAL.PCBI.1000815

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

journals/ploscb/GleesonCCHBFMDRBBDS10

6 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

release_d5p7flo4znc3pjmh3wiucfnau4

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/d5p7flo4znc3pjmh3wiucfnau4

24 November 2022

mapped directly with Wikidata item

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20585541%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

2 references