Single-Cell Profiling of Ebola Virus Disease In&#160;Vivo Reveals Viral and Host Dynamics (Q101410980)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33159858%20AND%20SRC:MED&resulttype=core&format=json

8 November 2020

title

Single-Cell Profiling of Ebola Virus Disease In Vivo Reveals Viral and Host Dynamics (English)

1 reference

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8 November 2020

main subject

Orthoebolavirus zairense

object named as

Ebola Virus

1 reference

26

Pardis C Sabeti

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33159858%20AND%20SRC:MED&resulttype=core&format=json

8 November 2020

25

Alex K Shalek

1 reference

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8 November 2020

21

Garry P Nolan

1 reference

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8 November 2020

22

Kayla G Barnes

1 reference

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8 November 2020

23

Lisa E Hensley

1 reference

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8 November 2020

2

Aaron E Lin

1 reference

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8 November 2020

author name string

Dylan Kotliar

1

1 reference

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8 November 2020

James Logue

3

1 reference

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8 November 2020

Travis K Hughes

4

1 reference

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8 November 2020

Nadine M Khoury

5

1 reference

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8 November 2020

Siddharth S Raju

6

1 reference

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8 November 2020

Marc H Wadsworth

7

1 reference

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8 November 2020

Han Chen

8

1 reference

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8 November 2020

Jonathan R Kurtz

9

1 reference

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8 November 2020

Bonnie Dighero-Kemp

10

1 reference

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8 November 2020

Zach B Bjornson

11

1 reference

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8 November 2020

Nilanjan Mukherjee

12

1 reference

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8 November 2020

Brian A Sellers

13

1 reference

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8 November 2020

Nancy Tran

14

1 reference

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8 November 2020

Matthew R Bauer

15

1 reference

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8 November 2020

Gordon C Adams

16

1 reference

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8 November 2020

Ricky Adams

17

1 reference

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8 November 2020

John L Rinn

18

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8 November 2020

Marta Melé

19

1 reference

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8 November 2020

Stephen F Schaffner

20

1 reference

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8 November 2020

David R McIlwain

24

1 reference

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8 November 2020

Richard S Bennett

27

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8 November 2020

publication date

2 November 2020

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8 November 2020

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describes a project that uses

8 November 2020

scikit-learn

object named as

Scikit-learn

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Depletion of Abundant Sequences by Hybridization (DASH): using Cas9 to remove unwanted high-abundance species in sequencing libraries and molecular counting applications.

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

The Domestic Ferret (Mustela putorius furo) as a Lethal Infection Model for 3 Species of Ebolavirus

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Human Monocyte Subsets and Phenotypes in Major Chronic Inflammatory Diseases

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Visualization of arenavirus RNA species in individual cells by single-molecule fluorescence in situ hybridization (smFISH) suggests a model of cyclical infection and clearance during persistence.

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Single-Cell Virus Sequencing of Influenza Infections That Trigger Innate Immunity

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Cas9 is a multiple-turnover enzyme

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

The dynein light chain 8 binding motif of rabies virus phosphoprotein promotes efficient viral transcription

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Pathogenesis of Ebola hemorrhagic fever in cynomolgus macaques: evidence that dendritic cells are early and sustained targets of infection

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Defective humoral responses and extensive intravascular apoptosis are associated with fatal outcome in Ebola virus-infected patients

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Immunologic timeline of Ebola virus disease and recovery in humans

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Seq-Well: portable, low-cost RNA sequencing of single cells at high throughput

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Quantification of Viral and Host Biomarkers in the Liver of Rhesus Macaques: a Longitudinal Study of Zaire Ebolavirus strain Kikwit (EBOV/Kik)

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Regulation of myelopoiesis by proinflammatory cytokines in infectious diseases.

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Phase 2 Placebo-Controlled Trial of Two Vaccines to Prevent Ebola in Liberia

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Interferon-γ Inhibits Ebola Virus Infection

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

The role of the Type I interferon response in the resistance of mice to filovirus infection

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Epigenetic programming of monocyte-to-macrophage differentiation and trained innate immunity.

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Monocyte human leukocyte antigen-DR transcriptional downregulation by cortisol during septic shock

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Ebola Virus Causes Intestinal Tract Architectural Disruption and Bacterial Invasion in Non-Human Primates

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Analysis of the highly diverse gene borders in Ebola virus reveals a distinct mechanism of transcriptional regulation

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Characterization of Staphylococcus aureus Cas9: a smaller Cas9 for all-in-one adeno-associated virus delivery and paired nickase applications.

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

The lack of maturation of Ebola virus-infected dendritic cells results from the cooperative effect of at least two viral domains

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Ebola: Anatomy of an Epidemic

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

West Nile Virus-Inclusive Single-Cell RNA Sequencing Reveals Heterogeneity in the Type I Interferon Response within Single Cells

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

T-cell-secreted TNF-alpha induces emergency myelopoiesis and myeloid-derived suppressor cell-differentiation in cancer

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Cutadapt removes adapter sequences from high-throughput sequencing reads

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Myeloid progenitor cluster formation drives emergency and leukaemic myelopoiesis.

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Dynein light chain LC8 is a dimerization hub essential in diverse protein networks.

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Host response dynamics following lethal infection of rhesus macaques with Zaire ebolavirus

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Defective interfering genomes and Ebola virus persistence

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Transcriptomic signatures differentiate survival from fatal outcomes in humans infected with Ebola virus

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Comprehensive innate immune profiling of chikungunya virus infection in pediatric cases

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Transcriptomic profiling of the development of the inflammatory response in human monocytes in vitro.

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Global suppression of the host antiviral response by Ebola- and Marburgviruses: increased antagonism of the type I interferon response is associated with enhanced virulence

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Expanded CD14+ CD16+ monocyte subpopulation in patients with acute and chronic infections undergoing hemodialysis.

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

Role of endosomal cathepsins in entry mediated by the Ebola virus glycoprotein

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

SCANPY: large-scale single-cell gene expression data analysis.

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data

30 October 2021

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1016/J.CELL.2020.10.002

10.1016/J.CELL.2020.10.002

30 October 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33159858%20AND%20SRC:MED&resulttype=core&format=json

8 November 2020

0 references

1 reference