ddSeeker: a tool for processing Bio-Rad ddSEQ single cell RNA-seq data (Q60934727)

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16 April 2020

title

ddSeeker: a tool for processing Bio-Rad ddSEQ single cell RNA-seq data (English)

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Angelo Di Leo

8

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Luca Malorni

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Matteo Benelli

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author name string

Giulia Boccalini

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16 April 2020

Martina Bonechi

3

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Chiara Biagioni

4

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Paola Fassan

5

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Roberto Bertorelli

6

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Veronica De Sanctis

7

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Ilenia Migliaccio

9

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language of work or name

English

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publication date

24 December 2018

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volume

19

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issue

1

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16 April 2020

page(s)

960

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Creative Commons Attribution 4.0 International

16 April 2020

copyright license

start time

1 December 2018

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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exact match

https://scigraph.springernature.com/pub.10.1186/s12864-018-5249-x

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cites work

Biopython: freely available Python tools for computational molecular biology and bioinformatics

1 reference

12 December 2020

The Sequence Alignment/Map format and SAMtools

1 reference

12 December 2020

Development and applications of single-cell transcriptome analysis

1 reference

12 December 2020

Single-cell sequencing-based technologies will revolutionize whole-organism science

1 reference

12 December 2020

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

1 reference

12 December 2020

Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma

1 reference

12 December 2020

Machine learning. Clustering by fast search and find of density peaks.

1 reference

12 December 2020

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

1 reference

12 December 2020

Defining cell types and states with single-cell genomics

1 reference

12 December 2020

Pooling across cells to normalize single-cell RNA sequencing data with many zero counts.

1 reference

12 December 2020

Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq

1 reference

12 December 2020

Application of single-cell RNA sequencing in optimizing a combinatorial therapeutic strategy in metastatic renal cell carcinoma.

1 reference

12 December 2020

Single-cell RNA-seq supports a developmental hierarchy in human oligodendroglioma

1 reference

12 December 2020

Single-cell mRNA quantification and differential analysis with Census

1 reference

12 December 2020

Scaling by shrinking: empowering single-cell 'omics' with microfluidic devices

1 reference

12 December 2020

SCnorm: robust normalization of single-cell RNA-seq data

1 reference

12 December 2020

Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer

1 reference

12 December 2020

An accurate and robust imputation method scImpute for single-cell RNA-seq data.

1 reference

12 December 2020

Integrating single-cell transcriptomic data across different conditions, technologies, and species

1 reference

12 December 2020

Chemoresistance Evolution in Triple-Negative Breast Cancer Delineated by Single-Cell Sequencing.

1 reference

12 December 2020

zUMIs - A fast and flexible pipeline to process RNA sequencing data with UMIs.

1 reference

12 December 2020

dropEst: pipeline for accurate estimation of molecular counts in droplet-based single-cell RNA-seq experiments.

1 reference

12 December 2020

Recovering Gene Interactions from Single-Cell Data Using Data Diffusion

1 reference

12 December 2020

scPipe: A flexible R/Bioconductor preprocessing pipeline for single-cell RNA-sequencing data

1 reference

12 December 2020

Single Cell Transcriptomics of Pancreatic Cancer Precursors Demonstrates Epithelial and Microenvironmental Heterogeneity as an Early Event in Neoplastic Progression

1 reference

12 December 2020

10.1186/S12864-018-5249-X

Identifiers

DOI

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Dimensions Publication ID

16 April 2020

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/s12864-018-5249-x

1 reference

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16 April 2020

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