Combining RNA-seq data and homology-based gene prediction for plants, animals and fungi. (Q54959556)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29843602%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

title

Combining RNA-seq data and homology-based gene prediction for plants, animals and fungi (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29843602%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

1 reference

1 reference

1

1 reference

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29 March 2020

Michael Han

3

1 reference

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29 March 2020

Jan Grau

5

1 reference

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29 March 2020

author name string

Frank Hartung

2

1 reference

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29 March 2020

Sven O Twardziok

4

1 reference

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29 March 2020

publication date

30 May 2018

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29 March 2020

1 reference

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29 March 2020

volume

19

1 reference

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29 March 2020

issue

1

1 reference

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29 March 2020

page(s)

189

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Creative Commons Attribution 4.0 International

29 March 2020

copyright license

start time

30 May 2018

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1186/s12859-018-2203-5

0 references

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CodingQuarry: highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts.

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14 June 2018

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Assessment of transcript reconstruction methods for RNA-seq

14 June 2018

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De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

14 June 2018

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A second-generation assembly of the Drosophila simulans genome provides new insights into patterns of lineage-specific divergence

14 June 2018

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Reference genome sequence of the model plant Setaria

14 June 2018

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MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

14 June 2018

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The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

14 June 2018

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A phylogeny and molecular barcodes for Caenorhabditis, with numerous new species from rotting fruits

14 June 2018

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14 June 2018

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

14 June 2018

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14 June 2018

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14 June 2018

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14 June 2018

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14 June 2018

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14 June 2018

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14 June 2018

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14 June 2018

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14 June 2018

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16 June 2018

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13 August 2018

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13 August 2018

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10.1186/S12859-018-2203-5

13 August 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29843602%20AND%20SRC:MED&resulttype=core&format=json

journals/bmcbi/KeilwagenHPTG18

29 March 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29843602%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

1 reference