Ammonium induces differential expression of methane and nitrogen metabolism-related genes in Methylocystis sp. strain SC2. (Q42774446)

7 November 2017

Ammonium induces differential expression of methane and nitrogen metabolism-related genes in Methylocystis sp. strain SC2. (English)

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7 November 2017

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7 November 2017

Bomba Dam

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7 November 2017

Somasri Dam

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2

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7 November 2017

Yongkyu Kim

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3

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7 November 2017

language of work or name

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18 February 2014

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Environmental Microbiology

7 November 2017

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3115-3127

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P(II) signal transduction proteins, pivotal players in microbial nitrogen control

7 November 2017

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Two isozymes of particulate methane monooxygenase with different methane oxidation kinetics are found in Methylocystis sp. strain SC2.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Structure and sequence conservation of hao cluster genes of autotrophic ammonia-oxidizing bacteria: evidence for their evolutionary history

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Nitrogen as a regulatory factor of methane oxidation in soils and sediments.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Stimulation by ammonium-based fertilizers of methane oxidation in soil around rice roots

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Quantitative RNA-seq analysis of the Campylobacter jejuni transcriptome

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Complete sequence analysis of two methanotroph-specific repABC-containing plasmids from Methylocystis sp. strain SC2.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Complete genome sequence of Methylocystis sp. strain SC2, an aerobic methanotroph with high-affinity methane oxidation potential.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Genome analysis coupled with physiological studies reveals a diverse nitrogen metabolism in Methylocystis sp. strain SC2.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

The Pseudomonas aeruginosa transcriptome in planktonic cultures and static biofilms using RNA sequencing

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

21 January 2018

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Maize (Zea mays L.) genome diversity as revealed by RNA-sequencing

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Effect of nitrogenous compounds on nitrogenase gene expression in anaerobic cultures of Anabaena variabilis

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Molecular phylogeny of type II methane-oxidizing bacteria isolated from various environments.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Evidence that participate methane monooxygenase and ammonia monooxygenase may be evolutionarily related

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Need-based activation of ammonium uptake in Escherichia coli

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Diversity and activity of methanotrophic bacteria in different upland soils

21 January 2018

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Diversity of methanotrophic bacteria in tropical upland soils under different land uses

21 January 2018

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The active methanotrophic community in hydromorphic soils changes in response to changing methane concentration.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

The nasFEDCBA operon for nitrate and nitrite assimilation in Klebsiella pneumoniae M5al

21 January 2018

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The regulation of nitrogen utilization in enteric bacteria

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

21 January 2018

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The effect of ammonium on assimilatory nitrate reduction in the haloarchaeon Haloferax mediterranei.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Global Molecular Analyses of Methane Metabolism in Methanotrophic Alphaproteobacterium, Methylosinus trichosporium OB3b. Part I: Transcriptomic Study

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Differential effects of nitrogenous fertilizers on methane-consuming microbes in rice field and forest soils

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Mapping and quantifying mammalian transcriptomes by RNA-Seq

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Ammonia cometabolism and product inhibition vary considerably among species of methanotrophic bacteria.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Effects of ammonium and nitrite on growth and competitive fitness of cultivated methanotrophic bacteria

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Yeast two-hybrid studies on interaction of proteins involved in regulation of nitrogen fixation in the phototrophic bacterium Rhodobacter capsulatus

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Transcription of nitrification genes by the methane-oxidizing bacterium, Methylococcus capsulatus strain Bath.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Comparative analysis of the conventional and novel pmo (particulate methane monooxygenase) operons from methylocystis strain SC2.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Integrative genomics viewer

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Alanine dehydrogenase of the N2-fixing blue-green alga, Anabaena cylindrica

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

mRNA-Seq analysis of the Pseudoperonospora cubensis transcriptome during cucumber (Cucumis sativus L.) infection

21 January 2018

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Identification and removal of ribosomal RNA sequences from metatranscriptomes

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Hydrogen evolution: A major factor affecting the efficiency of nitrogen fixation in nodulated symbionts

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Comparative RNA-seq analysis of early-infected peach leaves by the invasive phytopathogen Xanthomonas arboricola pv. pruni

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Nitrifying and denitrifying pathways of methanotrophic bacteria

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

21 January 2018

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RNA-Seq: a revolutionary tool for transcriptomics

21 January 2018

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Transcriptome Complexity in a Genome-Reduced Bacterium

21 January 2018

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Response and adaptation of different methanotrophic bacteria to low methane mixing ratios

21 January 2018

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https://api.crossref.org/works/10.1111%2F1462-2920.12367

21 January 2018

Identifiers

DOI

10.1111/1462-2920.12367

1 reference

7 November 2017

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