Integrated Proteomic and Genomic Analysis of Gastric Cancer Patient Tissues (Q38402575)

8 January 2018

title

Integrated Proteomic and Genomic Analysis of Gastric Cancer Patient Tissues (English)

1 reference

8 January 2018

0 references

14

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8 January 2018

Ling Yen Lee

object named as

Ling Y Lee

6

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Trey Ideker

11

object named as

Trey Ideker

1 reference

8 January 2018

Matan Hofree

10

object named as

Matan Hofree

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8 January 2018

author name string

Julia Fangfei Yan

1

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8 January 2018

Hoguen Kim

2

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8 January 2018

Seul-Ki Jeong

3

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8 January 2018

Hyoung-Joo Lee

4

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8 January 2018

Manveen K Sethi

5

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8 January 2018

Ronald C Beavis

7

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8 January 2018

Hogune Im

8

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8 January 2018

Michael P Snyder

9

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8 January 2018

Shiaw-Lin Wu

12

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8 January 2018

Young-Ki Paik

13

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8 January 2018

William S Hancock

15

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8 January 2018

language of work or name

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5 October 2015

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8 January 2018

Journal of Proteome Research

published in

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8 January 2018

volume

14

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8 January 2018

issue

12

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8 January 2018

page(s)

4995-5006

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8 January 2018

Pathway analysis and transcriptomics improve protein identification by shotgun proteomics from samples comprising small number of cells--a benchmarking study

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23 June 2018

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Genome wide proteomics of ERBB2 and EGFR and other oncogenic pathways in inflammatory breast cancer

23 June 2018

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Proteogenomic analysis of human colon carcinoma cell lines LIM1215, LIM1899, and LIM2405.

23 June 2018

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A chromosome-centric human proteome project (C-HPP) to characterize the sets of proteins encoded in chromosome 17.

23 June 2018

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A case of advanced gastric cancer.

23 June 2018

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A comprehensive survey of genomic alterations in gastric cancer reveals systematic patterns of molecular exclusivity and co-occurrence among distinct therapeutic targets

23 June 2018

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Translational genomics: the challenge of developing cancer biomarkers

23 June 2018

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HER2 testing in gastric cancer: a practical approach

23 June 2018

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Differential sensitivity of ERBB2 kinase domain mutations towards lapatinib

23 June 2018

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Translational control of TOP2A influences doxorubicin efficacy

23 June 2018

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Assessment of ERBB2 and EGFR gene amplification and protein expression in gastric carcinoma by immunohistochemistry and fluorescence in situ hybridization

23 June 2018

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Her-2/neu testing and therapy in gastroesophageal adenocarcinoma

23 June 2018

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Three-gene predictor of clinical outcome for gastric cancer patients treated with chemotherapy

23 June 2018

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Genome profiling of ERBB2-amplified breast cancers

23 June 2018

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Silencing of ErbB3/ErbB2 signaling by immunoglobulin-like Necl-2.

23 June 2018

1 reference

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Expression of ErbB receptors and their cognate ligands in gastric and colon cancer cell lines.

23 June 2018

1 reference

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RNA-Seq: a revolutionary tool for transcriptomics

23 June 2018

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Human telomerase reverse transcriptase promoter-driven oncolytic adenovirus with E1B-19 kDa and E1B-55 kDa gene deletions

23 June 2018

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HER2 in gastric cancer: a new prognostic factor and a novel therapeutic target

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

Assessment of a HER2 scoring system for gastric cancer: results from a validation study

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

GRB-7 facilitates HER-2/Neu-mediated signal transduction and tumor formation

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

Epidermal growth factor receptor mutations in lung cancer

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

Using annotated peptide mass spectrum libraries for protein identification

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

Amplification of HER-2 in gastric carcinoma: association with Topoisomerase IIalpha gene amplification, intestinal type, poor prognosis and sensitivity to trastuzumab.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

Gastric adenocarcinoma: review and considerations for future directions

23 June 2018

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ERBB2 amplifications in esophageal adenocarcinoma

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

Transcriptional signature of an adult brain tumor in Drosophila

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

Evolutionary recombination hotspot around GSDML-GSDM locus is closely linked to the oncogenomic recombination hotspot around the PPP1R1B-ERBB2-GRB7 amplicon

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

Comparative multi-methodological measurement of ERBB2 status in breast cancer

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

The eukaryotic genome: a system regulated at different hierarchical levels

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

Myc and mammary cancer: Myc is a downstream effector of the ErbB2 receptor tyrosine kinase

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

Overexpression of ErbB2 in cancer and ErbB2-targeting strategies

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

Computational methods for the identification of differential and coordinated gene expression.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

EGFR promotes lung tumorigenesis by activating miR-7 through a Ras/ERK/Myc pathway that targets the Ets2 transcriptional repressor ERF.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

Alterations of the CCND1 and HER-2/neu (ERBB2) proteins in esophageal and gastric cancers

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5706558

New amplified and highly expressed genes discovered in the ERBB2 amplicon in breast cancer by cDNA microarrays

31 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26435392

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Status of c-erbB-2 in gastric adenocarcinoma: a comparative study of immunohistochemistry, fluorescence in situ hybridization and enzyme-linked immuno-sorbent assay

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26435392

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Prognostic factors in gastric cancer

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26435392

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/ACS.JPROTEOME.5B00827

1 reference

8 January 2018

PMCID

5706558

1 reference

8 January 2018

PubMed ID

26435392

1 reference

8 January 2018