Ultra deep sequencing of Listeria monocytogenes sRNA transcriptome revealed new antisense RNAs (Q37548346)

21 August 2017

Ultra deep sequencing of Listeria monocytogenes sRNA transcriptome revealed new antisense RNAs (English)

1 reference

21 August 2017

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Listeria monocytogenes

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Ramakanth Madhugiri

5

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Stefanie Widder

object named as

Stefanie Widder

2

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Thomas Rattei

object named as

Thomas Rattei

8

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author name string

Sebastian Behrens

1

1 reference

21 August 2017

Gopala Krishna Mannala

3

1 reference

21 August 2017

Xiaoxing Qing

4

1 reference

21 August 2017

Nathalie Kefer

6

1 reference

21 August 2017

Mobarak Abu Mraheil

7

1 reference

21 August 2017

Torsten Hain

9

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21 August 2017

language of work or name

English

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publication date

3 February 2014

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21 August 2017

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21 August 2017

9

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21 August 2017

2

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21 August 2017

e83979

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Creative Commons Attribution 4.0 International

21 August 2017

start time

3 February 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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1 reference

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Comparative transcriptomics of pathogenic and non-pathogenic Listeria species

23 August 2017

1 reference

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Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes

23 August 2017

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Toward a Systemic Understanding of Listeria monocytogenes Metabolism during Infection

23 August 2017

1 reference

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The transcriptional landscape of Chlamydia pneumoniae

23 August 2017

1 reference

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Regulation by small RNAs in bacteria: expanding frontiers

23 August 2017

1 reference

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Association of ActA to peptidoglycan revealed by cell wall proteomics of intracellular Listeria monocytogenes

23 August 2017

1 reference

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Hfq and its constellation of RNA

23 August 2017

1 reference

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The intracellular sRNA transcriptome of Listeria monocytogenes during growth in macrophages

23 August 2017

1 reference

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Deciphering the intracellular metabolism of Listeria monocytogenes by mutant screening and modelling

23 August 2017

1 reference

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progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

23 August 2017

1 reference

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Identification of regulatory RNAs in Bacillus subtilis

23 August 2017

1 reference

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Carbon metabolism of intracellular bacterial pathogens and possible links to virulence

23 August 2017

1 reference

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The primary transcriptome of the major human pathogen Helicobacter pylori

23 August 2017

1 reference

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Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs

23 August 2017

1 reference

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Sequencing technologies - the next generation

23 August 2017

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Mining regulatory 5'UTRs from cDNA deep sequencing datasets

23 August 2017

1 reference

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Evidence for a major role of antisense RNAs in cyanobacterial gene regulation

23 August 2017

1 reference

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In vivo transcriptional profiling of Listeria monocytogenes and mutagenesis identify new virulence factors involved in infection

23 August 2017

1 reference

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The Listeria transcriptional landscape from saprophytism to virulence.

23 August 2017

1 reference

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Regulatory RNAs in bacteria

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3911899

A quantitative comparison of sRNA-based and protein-based gene regulation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3911899

Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3911899

An abundance of RNA regulators

23 August 2017

1 reference

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Micros for microbes: non-coding regulatory RNAs in bacteria

23 August 2017

1 reference

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Lysergic acid diethylamide- and mescaline-induced attenuation of the effect of punishment in the rat

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3911899

Artemis: sequence visualization and annotation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3911899

Variation and evolution of the citric-acid cycle: a genomic perspective.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3911899

Bacterial transcriptomics: what is beyond the RNA horiz-ome?

23 August 2017

1 reference

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Complete nucleotide sequence, molecular analysis and genome structure of bacteriophage A118 of Listeria monocytogenes: implications for phage evolution

6 September 2017

1 reference

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Intracellular gene expression profile of Listeria monocytogenes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3911899

Antisense RNA control in bacteria, phages, and plasmids

14 September 2017

1 reference

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Prokaryotic whole-transcriptome analysis: deep sequencing and tiling arrays

14 September 2017

1 reference

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The influence of Hfq and ribonucleases on the stability of the small non-coding RNA OxyS and its target rpoS in E. coli is growth phase dependent.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3911899

Identification of small noncoding RNAs in Helicobacter pylori by a bioinformatics-based approach.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3911899

Transcriptome analysis of Listeria monocytogenes identifies three groups of genes differently regulated by PrfA.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3911899

Purine Biosynthesis Mutants (purA and purB) of Serotype 4b Listeria monocytogenes Are Severely Attenuated for Systemic Infection in Intragastrically Inoculated A/J Mice

1 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0083979

Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24498259

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0083979

1 reference

21 August 2017

0 references

1 reference

21 August 2017

1 reference