Complete genome sequence and transcriptomic analysis of a novel marine strain Bacillus weihaiensis reveals the mechanism of brown algae degradation (Q37453906)

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English	Complete genome sequence and transcriptomic analysis of a novel marine strain Bacillus weihaiensis reveals the mechanism of brown algae degradation	scientific article

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scholarly article

1 reference

Europe PubMed Central

20 August 2017

Complete genome sequence and transcriptomic analysis of a novel marine strain Bacillus weihaiensis reveals the mechanism of brown algae degradation (English)

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Europe PubMed Central

20 August 2017

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whole genome sequencing

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based on heuristic

inferred from title

object named as

Jibin Sun

7

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author name string

Yueming Zhu

1

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Europe PubMed Central

20 August 2017

Peng Chen

2

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Europe PubMed Central

20 August 2017

Yunjuan Bao

3

1 reference

Europe PubMed Central

20 August 2017

Yan Men

4

1 reference

Europe PubMed Central

20 August 2017

Yan Zeng

5

1 reference

Europe PubMed Central

20 August 2017

Jiangang Yang

6

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Europe PubMed Central

20 August 2017

Yuanxia Sun

8

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Europe PubMed Central

20 August 2017

language of work or name

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publication date

30 November 2016

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Europe PubMed Central

20 August 2017

Scientific Reports

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Europe PubMed Central

20 August 2017

6

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Europe PubMed Central

20 August 2017

38248

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Europe PubMed Central

20 August 2017

describes a project that uses

object named as

DESeq

DESeq R package

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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https://scigraph.springernature.com/pub.10.1038/srep38248

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Bioprospecting around Arctic islands: Marine bacteria as rich source of biocatalysts.

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23 August 2017

Algae-bacteria interactions: Evolution, ecology and emerging applications

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23 August 2017

Novel Alginate Lyase (Aly5) from a Polysaccharide-Degrading Marine Bacterium, Flammeovirga sp. Strain MY04: Effects of Module Truncation on Biochemical Characteristics, Alginate Degradation Patterns, and Oligosaccharide-Yielding Properties

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23 August 2017

Alginate lyase: Review of major sources and classification, properties, structure-function analysis and applications

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23 August 2017

Molecular insight into the role of the N-terminal extension in the maturation, substrate recognition, and catalysis of a bacterial alginate lyase from polysaccharide lyase family 18.

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23 August 2017

Microorganisms living on macroalgae: diversity, interactions, and biotechnological applications.

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23 August 2017

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

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Alginate: properties and biomedical applications

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23 August 2017

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23 August 2017

High-throughput generation, optimization and analysis of genome-scale metabolic models

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23 August 2017

Molecular identification of unsaturated uronate reductase prerequisite for alginate metabolism in Sphingomonas sp. A1

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23 August 2017

Fucoidan: structure and bioactivity.

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23 August 2017

Microbial structuring of marine ecosystems

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23 August 2017

The KEGG resource for deciphering the genome

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23 August 2017

ALGINATE LYASE: review of major sources and enzyme characteristics, structure-function analysis, biological roles, and applications.

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23 August 2017

The COG database: a tool for genome-scale analysis of protein functions and evolution

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A two-component system regulates the expression of an ABC transporter for xylo-oligosaccharides in Geobacillus stearothermophilus.

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23 August 2017

Overproduction of heterologous mannitol 1-phosphatase: a key factor for engineering mannitol production by Lactococcus lactis

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23 August 2017

The laminarinase from thermophilic eubacterium Rhodothermus marinus--conformation, stability, and identification of active site carboxylic residues by site-directed mutagenesis

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23 August 2017

Identification of a 4-deoxy-L-erythro-5-hexoseulose uronic acid reductase, FlRed, in an alginolytic bacterium Flavobacterium sp. strain UMI-01.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5128808

26 June 2018

Structure-based conversion of the coenzyme requirement of a short-chain dehydrogenase/reductase involved in bacterial alginate metabolism

1 reference

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26 June 2018

Characterization of an alginate lyase, FlAlyA, from Flavobacterium sp. strain UMI-01 and its expression in Escherichia coli

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5128808

26 June 2018

Molecular and biochemical characterization of an endo-beta-1,3- glucanase of the hyperthermophilic archaeon Pyrococcus furiosus.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5128808

26 June 2018

Efficient ethanol production from brown macroalgae sugars by a synthetic yeast platform

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2 September 2018

An engineered microbial platform for direct biofuel production from brown macroalgae.

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2 September 2018

CAZymes Analysis Toolkit (CAT): web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database.

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2 September 2018

Analysis of extracellular alginate lyase and its gene from a marine bacterial strain, Pseudoalteromonas atlantica AR06.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5128808

2 September 2018

Substrate recognition by family 7 alginate lyase from Sphingomonas sp. A1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5128808

2 September 2018

Characterization of marine bacteria and the activity of their enzyme systems involved in degradation of the algal storage glucan laminarin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5128808

2 September 2018

Structure and function of a hypothetical Pseudomonas aeruginosa protein PA1167 classified into family PL-7: a novel alginate lyase with a beta-sandwich fold

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5128808

2 September 2018

Use of Dinitrosalicylic Acid Reagent for Determination of Reducing Sugar

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https://api.crossref.org/works/10.1038%2FSREP38248

21 January 2018

Extraction, structure and biofunctional activities of laminarin from brown algae

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https://api.crossref.org/works/10.1038%2FSREP38248

21 January 2018

Overexpression in Escherichia coli, purification, and characterization of Sphingomonas sp. A1 alginate lyases

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12 December 2020

based on heuristic

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Purification and determination of the action pattern of Haliotis tuberculata laminarinase

1 reference

https://pubmed.ncbi.nlm.nih.gov/27901120

12 December 2020

based on heuristic

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Regulatory relationship of two-component and ABC transport systems and clustering of their genes in the Bacillus/Clostridium group, suggest a functional link between them

1 reference

https://pubmed.ncbi.nlm.nih.gov/27901120

12 December 2020

based on heuristic

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10.1038/SREP38248

1 reference

Europe PubMed Central

20 August 2017

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1 reference

Europe PubMed Central

20 August 2017

1 reference

Europe PubMed Central

20 August 2017

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