The RNASeq-er API - a gateway to systematically updated analysis of public RNA-Seq data. (Q36332136)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28369191%20AND%20SRC:MED&resulttype=core&format=json

15 March 2020

title

The RNASeq-er API-a gateway to systematically updated analysis of public RNA-seq data (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28369191%20AND%20SRC:MED&resulttype=core&format=json

15 March 2020

0 references

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1

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15 March 2020

Alvis Brazma

7

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15 March 2020

Nuno A. Fonseca

2

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15 March 2020

Anja Füllgrabe

3

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15 March 2020

Maria C Keays

5

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15 March 2020

Amy Y Tang

6

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15 March 2020

author name string

Laura Huerta

4

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15 March 2020

language of work or name

English

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publication date

1 July 2017

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15 March 2020

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15 March 2020

volume

33

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issue

14

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15 March 2020

page(s)

2218-2220

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Creative Commons Attribution 4.0 International

15 March 2020

copyright license

start time

23 March 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Single-cell genomics: coming of age

1 reference

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WormBase 2016: expanding to enable helminth genomic research

2 July 2018

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Expression Atlas update--an integrated database of gene and protein expression in humans, animals and plants.

2 July 2018

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Content discovery and retrieval services at the European Nucleotide Archive

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870697

ArrayExpress update--simplifying data submissions

2 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870697

2 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870697

HTSeq--a Python framework to work with high-throughput sequencing data

2 July 2018

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Expression Atlas update--a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870697

Updates to BioSamples database at European Bioinformatics Institute

2 July 2018

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Ensembl Genomes 2013: scaling up access to genome-wide data

2 July 2018

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BioServices: a common Python package to access biological Web Services programmatically

2 July 2018

1 reference

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TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

2 July 2018

1 reference

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STAR: ultrafast universal RNA-seq aligner

2 July 2018

1 reference

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Detecting differential usage of exons from RNA-seq data

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870697

Efficient storage of high throughput DNA sequencing data using reference-based compression

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870697

The Sequence Alignment/Map format and SAMtools

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870697

10.1093/BIOINFORMATICS/BTX143

2 July 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28369191%20AND%20SRC:MED&resulttype=core&format=json

journals/bioinformatics/PetryszakFFHKTB17

15 March 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28369191%20AND%20SRC:MED&resulttype=core&format=json

15 March 2020

1 reference