Computational inference of mRNA stability from histone modification and transcriptome profiles (Q36144746)

12 August 2017

Computational inference of mRNA stability from histone modification and transcriptome profiles (English)

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12 August 2017

0 references

7

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12 August 2017

Chengyang Wang

1

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12 August 2017

Rui Tian

2

1 reference

12 August 2017

Qian Zhao

3

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12 August 2017

Han Xu

4

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12 August 2017

Clifford A Meyer

5

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12 August 2017

Cheng Li

6

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12 August 2017

X Shirley Liu

8

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12 August 2017

language of work or name

English

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publication date

10 April 2012

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12 August 2017

10

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based on heuristic

inferred from page(s)

published in

Nucleic Acids Research

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12 August 2017

40

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12 August 2017

14

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12 August 2017

6414-6423

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Creative Commons Attribution-NonCommercial 3.0 Unported

12 August 2017

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/3413115

based on heuristic

inferred from PubMed Central ID database lookup

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Histone modification levels are predictive for gene expression

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2 October 2017

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2 October 2017

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2 October 2017

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Histone H2A monoubiquitination represses transcription by inhibiting RNA polymerase II transcriptional elongation

2 October 2017

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2 October 2017

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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

2 October 2017

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2 October 2017

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The complex language of chromatin regulation during transcription

2 October 2017

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High-resolution profiling of histone methylations in the human genome

2 October 2017

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The role of chromatin during transcription

2 October 2017

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Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

2 October 2017

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

2 October 2017

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Polycomb complexes repress developmental regulators in murine embryonic stem cells

2 October 2017

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Degradation of RNA in bacteria: comparison of mRNA and stable RNA

2 October 2017

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Genomic maps and comparative analysis of histone modifications in human and mouse

2 October 2017

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An important role for RNase R in mRNA decay

2 October 2017

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Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets

2 October 2017

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Histone modifications as key regulators of transcription

2 October 2017

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The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote

2 October 2017

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The RNA polymerase II transcription cycle: cycling through chromatin

2 October 2017

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MicroRNAs: genomics, biogenesis, mechanism, and function

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3413115

Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3413115

Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3413115

Genome-wide analysis of mRNA decay in resting and activated primary human T lymphocytes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3413115

MRNA stability and the control of gene expression: implications for human disease

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3413115

Translating the Histone Code

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3413115

High-resolution gene expression profiling for simultaneous kinetic parameter analysis of RNA synthesis and decay

2 October 2017

1 reference

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Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3413115

Mapping global histone acetylation patterns to gene expression

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3413115

23 September 2018

Identifiers

DOI

10.1093/NAR/GKS304

1 reference

12 August 2017

1 reference

12 August 2017

1 reference