The integration host factor of Escherichia coli binds to multiple sites at plasmid R6K gamma origin and is essential for replication (Q36002426)

11 August 2017

The integration host factor of Escherichia coli binds to multiple sites at plasmid R6K gamma origin and is essential for replication (English)

1 reference

11 August 2017

1 reference

M Filutowicz

1

1 reference

PMCID

336559

11 August 2017

K Appelt

series ordinal

2

1 reference

PMCID

336559

11 August 2017

language of work or name

English

0 references

publication date

1 May 1988

1 reference

11 August 2017

Nucleic Acids Research

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11 August 2017

16

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11 August 2017

9

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11 August 2017

3829-3843

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Primary structure of the essential replicon of the plasmid pSC101.

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Release of initiation control by a mutational alteration in the R6K pi protein required for plasmid DNA replication

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Plasmid R6K DNA replication. II. Direct nucleotide sequence repeats are required for an active gamma-origin.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Synergistic effect of himA and gyrB mutations: evidence that him functions control expression of ilv and xyl genes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Circular R-Factor Molecules Controlling Penicillinase Synthesis, Replicating in Escherichia coli Under Either Relaxed or Stringent Control

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Autorepressor properties of the pi-initiation protein encoded by plasmid R6K.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Mutations in direct repeat sequences and in a conserved sequence adjacent to the repeats result in a defective replication origin in plasmid R6K.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Replication initiator protein of plasmid R6K autoregulates its own synthesis at the transcriptional step

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Positive and negative roles of an initiator protein at an origin of replication

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Purification and properties of the mini-F plasmid-encoded E protein needed for autonomous replication control of the plasmid

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Curved DNA: design, synthesis, and circularization

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Translation initiation of bacteriophage lambda gene cII requires integration host factor

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Trans-complementation-dependent replication of a low molecular weight origin fragment from plasmid R6K

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Nucleotide sequence of the region of an origin of replication of the antibiotic resistance plasmid R6K

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Requirement of a plasmid-encoded protein for replication in vitro of plasmid R6K

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Characterization of DNA strand breakage in vitro by the antitumor protein neocarzinostatin

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Structural properties of the beta origin of replication of plasmid R6K.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Purification and properties of the Escherichia coli protein factor required for lambda integrative recombination

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

E. coli integration host factor binds to specific sites in DNA

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

P1 plasmid replication. Purification and DNA-binding activity of the replication protein RepA.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Poly(dA).poly(dT) is a B-type double helix with a distinctively narrow minor groove

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Replication of pSC101: effects of mutations in the E. coli DNA binding protein IHF.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Replication from one of the three origins of the plasmid R6K requires coupled expression of two plasmid-encoded proteins.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Binding of purified wild-type and mutant pi initiation proteins to a replication origin region of plasmid R6K.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Sequence-specific DNA binding of the Epstein-Barr virus nuclear antigen (EBNA-1) to clustered sites in the plasmid maintenance region

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

The phi 80 and P22 attachment sites. Primary structure and interaction with Escherichia coli integration host factor.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Escherichia coli integration host factor bends the DNA at the ends of IS1 and in an insertion hotspot with multiple IHF binding sites

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

A replication initiator protein enhances the rate of hybrid formation between a silencer RNA and an activator RNA.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Plasmid R6K DNA replication. III. Regulatory properties of the pi initiation protein.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Plasmid R6K DNA replication. I. Complete nucleotide sequence of an autonomously replicating segment.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Direct role of the himA gene product in phage λ integration

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Activity in vitro of three replication origins of the antibiotic resistance plasmid RSF1040

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

Control of phage λ development by stability and synthesis of cll protein: Role of the viral clll and host hflA, himA and himD genes

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

The integration host factor of Escherichia coli binds to bent DNA at the origin of replication of the plasmid pSC101.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336559

A phi 80 function inhibitory for growth of lambdoid phage in him mutants of Escherichia coli deficient in integration host factor. II. Physiological analysis of the abortive infection

23 September 2018

1 reference

12 December 2020

Transcription signals in a region essential for replication of plasmid R6K

1 reference

12 December 2020

Role of the pi initiation protein and direct nucleotide sequence repeats in the regulation of plasmid R6K replication

1 reference

12 December 2020

Positive and negative regulation of the Mu operator by Mu repressor and Escherichia coli integration host factor

1 reference

12 December 2020

Three origins of replication are active in vivo in the R plasmid RSF1040

1 reference

12 December 2020

Interaction of the plasmid R6K-encoded replication initiator protein with its binding sites on DNA

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/16.9.3829

1 reference

11 August 2017

1 reference

11 August 2017

1 reference

PMCID

336559