Ancient gene duplications have shaped developmental stage-specific expression in Pristionchus pacificus (Q35775351)

10 August 2017

Ancient gene duplications have shaped developmental stage-specific expression in Pristionchus pacificus (English)

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10 August 2017

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Pristionchus pacificus

Pristionchus pacificus

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based on heuristic

inferred from title

author

Christian Rödelsperger

2

Christian Rödelsperger

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Praveen Baskaran

Praveen Baskaran

1

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Gabriel V. Markov

Gabriel V Markov

5

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author name string

Christian Rödelsperger

2

1 reference

10 August 2017

Neel Prabh

3

1 reference

10 August 2017

Vahan Serobyan

4

1 reference

10 August 2017

Antje Hirsekorn

6

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10 August 2017

Christoph Dieterich

7

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10 August 2017

15 September 2015

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10 August 2017

BMC Evolutionary Biology

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10 August 2017

15

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10 August 2017

185

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https://scigraph.springernature.com/pub.10.1186/s12862-015-0466-2

10 August 2017

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cites work

Microevolution of Duplications and Deletions and Their Impact on Gene Expression in the Nematode Pristionchus pacificus

1 reference

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Complexity of gene expression evolution after duplication: protein dosage rebalancing

12 July 2018

1 reference

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Natural variation in dauer pheromone production and sensing supports intraspecific competition in nematodes

12 July 2018

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Two new and two recharacterized species from a radiation of pristionchus (nematoda: diplogastridae) in europe

12 July 2018

1 reference

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Characterization of genetic diversity in the nematode Pristionchus pacificus from population-scale resequencing data

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

A novel method for cross-species gene expression analysis.

12 July 2018

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Genome-wide identification, characterization, and expression analysis of lineage-specific genes within zebrafish

12 July 2018

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RNAseq analysis of the parasitic nematode Strongyloides stercoralis reveals divergent regulation of canonical dauer pathways.

12 July 2018

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System wide analysis of the evolution of innate immunity in the nematode model species Caenorhabditis elegans and Pristionchus pacificus

12 July 2018

1 reference

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Genome-wide analysis of germline signaling genes regulating longevity and innate immunity in the nematode Pristionchus pacificus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Divergent gene expression in the conserved dauer stage of the nematodes Pristionchus pacificus and Caenorhabditis elegans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

12 July 2018

1 reference

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Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis

12 July 2018

1 reference

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The draft genome of the parasitic nematode Trichinella spiralis

12 July 2018

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ProtTest 3: fast selection of best-fit models of protein evolution

12 July 2018

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A spatial and temporal map of C. elegans gene expression

12 July 2018

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phangorn: phylogenetic analysis in R

12 July 2018

1 reference

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A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns

12 July 2018

1 reference

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The genetic basis of evolutionary change in gene expression levels

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

The relationship among gene expression, the evolution of gene dosage, and the rate of protein evolution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Proteogenomics of Pristionchus pacificus reveals distinct proteome structure of nematode models

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

A conserved endocrine mechanism controls the formation of dauer and infective larvae in nematodes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

The Pristionchus pacificus genome provides a unique perspective on nematode lifestyle and parasitism

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Mapping and quantifying mammalian transcriptomes by RNA-Seq

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Chemosensation in C. elegans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Pristionchus pacificus: a well-rounded nematode

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

The altered evolutionary trajectories of gene duplicates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Discovering statistically significant biclusters in gene expression data

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Orthologs and paralogs - we need to get it right

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

A molecular evolutionary framework for the phylum Nematoda

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

The neural circuit for touch sensitivity in Caenorhabditis elegans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Pharyngeal pumping continues after laser killing of the pharyngeal nervous system of C. elegans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

A wax ester promotes collective host finding in the nematode Pristionchus pacificus.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

BLIND ordering of large-scale transcriptomic developmental timecourses.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Clustal Omega, accurate alignment of very large numbers of sequences.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Cryptic variation in vulva development by cis-regulatory evolution of a HAIRY-binding site

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

System-wide rewiring underlies behavioral differences in predatory and bacterial-feeding nematodes.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Expressional and functional variation of horizontally acquired cellulases in the nematode Pristionchus pacificus.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Developmental milestones punctuate gene expression in the Caenorhabditis embryo.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Genome evolution and developmental constraint in Caenorhabditis elegans.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Genomic analysis of gene expression in C. elegans.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4570658

Unifying measures of gene function and evolution

25 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26370559

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12862-015-0466-2

1 reference

Dimensions Publication ID

10 August 2017

0 references

1 reference

10 August 2017

1 reference