Argonaute-1 binds transcriptional enhancers and controls constitutive and alternative splicing in human cells (Q34480743)

2 August 2017

Argonaute-1 binds transcriptional enhancers and controls constitutive and alternative splicing in human cells (English)

1 reference

alternative mRNA splicing, via spliceosome

2 August 2017

0 references

1 reference

20

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5 June 2020

Eneritz Agirre

2

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5 June 2020

Nicolas Bellora

7

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5 June 2020

Ezequiel Petrillo

9

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5 June 2020

Matías Blaustein

10

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5 June 2020

Gwendal Dujardin

12

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5 June 2020

Federico Pelisch

14

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5 June 2020

Juan Valcárcel

19

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5 June 2020

Alberto Kornblihtt

21

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5 June 2020

17

Anabella Srebrow

1 reference

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5 June 2020

13

Berta Pozzi

1 reference

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5 June 2020

author name string

Mariano Alló

1

1 reference

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5 June 2020

Sergey Bessonov

3

1 reference

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5 June 2020

Paola Bertucci

4

1 reference

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5 June 2020

Luciana Gómez Acuña

5

1 reference

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5 June 2020

Valeria Buggiano

6

1 reference

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5 June 2020

Babita Singh

8

1 reference

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5 June 2020

Belén Miñana

11

1 reference

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5 June 2020

Elías Bechara

15

1 reference

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5 June 2020

Dmitry E Agafonov

16

1 reference

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5 June 2020

Reinhard Lührmann

18

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5 June 2020

language of work or name

English

0 references

publication date

13 October 2014

1 reference

Proceedings of the National Academy of Sciences of the United States of America

2 August 2017

1 reference

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5 June 2020

volume

111

1 reference

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5 June 2020

issue

44

1 reference

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5 June 2020

page(s)

15622-15629

1 reference

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Characterizing a collective and dynamic component of chromatin immunoprecipitation enrichment profiles in yeast

5 June 2020

cites work

1 reference

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Widespread misinterpretable ChIP-seq bias in yeast

6 July 2018

1 reference

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High-resolution mapping of transcription factor binding sites on native chromatin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Highly expressed loci are vulnerable to misleading ChIP localization of multiple unrelated proteins

6 July 2018

1 reference

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Ago1 Interacts with RNA polymerase II and binds to the promoters of actively transcribed genes in human cancer cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Intragenic epigenetic changes modulate NCAM alternative splicing in neuronal differentiation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation

6 July 2018

1 reference

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Progesterone receptor induces bcl-x expression through intragenic binding sites favoring RNA polymerase II elongation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Activating RNAs associate with Mediator to enhance chromatin architecture and transcription

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Two new and distinct roles for Drosophila Argonaute-2 in the nucleus: alternative pre-mRNA splicing and transcriptional repression.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Intragenic enhancers act as alternative promoters

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Chromatin-associated RNA interference components contribute to transcriptional regulation in Drosophila

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Pyicos: a versatile toolkit for the analysis of high-throughput sequencing data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Splicing enhances recruitment of methyltransferase HYPB/Setd2 and methylation of histone H3 Lys36.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Mapping and analysis of chromatin state dynamics in nine human cell types

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Gene silencing by microRNAs: contributions of translational repression and mRNA decay

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Epigenetics in alternative pre-mRNA splicing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

A unique chromatin signature uncovers early developmental enhancers in humans

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Histone H3K27ac separates active from poised enhancers and predicts developmental state

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Cotranscriptional exon skipping in the genotoxic stress response

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Widespread transcription at neuronal activity-regulated enhancers

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Regulation of alternative splicing by histone modifications

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

The complex eukaryotic transcriptome: unexpected pervasive transcription and novel small RNAs

6 July 2018

1 reference

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DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Promoter targeted small RNAs induce long-term transcriptional gene silencing in human cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Neuronal cell depolarization induces intragenic chromatin modifications affecting NCAM alternative splicing.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Alternative isoform regulation in human tissue transcriptomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Integration of external signaling pathways with the core transcriptional network in embryonic stem cells

6 July 2018

1 reference

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Closed chromatin architecture is induced by an RNA duplex targeting the HIV-1 promoter region

6 July 2018

1 reference

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The transcriptional cycle of HIV-1 in real-time and live cells.

6 July 2018

1 reference

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Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

In vivo dynamics of RNA polymerase II transcription.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Argonaute-1 directs siRNA-mediated transcriptional gene silencing in human cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Hotspots of transcription factor colocalization in the genome of Drosophila melanogaster

6 July 2018

1 reference

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Gene expression signatures and biomarkers of noninvasive and invasive breast cancer cells: comprehensive profiles by representational difference analysis, microarrays and proteomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Small interfering RNA-induced transcriptional gene silencing in human cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

MicroRNAs: genomics, biogenesis, mechanism, and function

6 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

6 July 2018

https://api.crossref.org/works/10.1073%2FPNAS.1416858111

A slow RNA polymerase II affects alternative splicing in vivo

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Alternative splicing: multiple control mechanisms and involvement in human disease

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226100

Control of alternative splicing through siRNA-mediated transcriptional gene silencing.

6 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1416858111

Argonaute proteins couple chromatin silencing to alternative splicing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1416858111

How slow RNA polymerase II elongation favors alternative exon skipping.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1416858111

Chromatin and Alternative Splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1416858111

21 January 2018

Identifiers

DOI

10.1073/PNAS.1416858111

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25313066%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25313066%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25313066%20AND%20SRC:MED&resulttype=core&format=json