Identification and Comparative Analysis of Differential Gene Expression in Soybean Leaf Tissue under Drought and Flooding Stress Revealed by RNA-Seq (Q33363626)

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scientific article published on 19 July 2016

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English	Identification and Comparative Analysis of Differential Gene Expression in Soybean Leaf Tissue under Drought and Flooding Stress Revealed by RNA-Seq	scientific article published on 19 July 2016

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scholarly article

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Europe PubMed Central

26 July 2017

Identification and Comparative Analysis of Differential Gene Expression in Soybean Leaf Tissue under Drought and Flooding Stress Revealed by RNA-Seq (English)

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Europe PubMed Central

26 July 2017

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Babu Valliyodan

object named as

Babu Valliyodan

13

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Rupesh K. Deshmukh

object named as

Rupesh K Deshmukh

5

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Rajeev Kumar Varshney

object named as

Rajeev K Varshney

14

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Gunvant B Patil

3

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author name string

Wei Chen

1

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Europe PubMed Central

26 July 2017

Qiuming Yao

2

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Europe PubMed Central

26 July 2017

Gaurav Agarwal

4

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Europe PubMed Central

26 July 2017

Li Lin

6

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Europe PubMed Central

26 July 2017

Biao Wang

7

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Europe PubMed Central

26 July 2017

Yongqin Wang

8

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Europe PubMed Central

26 July 2017

Silvas J Prince

9

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Europe PubMed Central

26 July 2017

Li Song

10

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Europe PubMed Central

26 July 2017

Dong Xu

11

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26 July 2017

Yongqiang C An

12

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26 July 2017

Henry T Nguyen

15

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26 July 2017

publication date

19 July 2016

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26 July 2017

Frontiers in Plant Science

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26 July 2017

7

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26 July 2017

1044

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26 July 2017

describes a project that uses

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Genomic-assisted haplotype analysis and the development of high-throughput SNP markers for salinity tolerance in soybean

1 reference

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Characterization of proteins in soybean roots under flooding and drought stresses

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1 reference

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The submergence tolerance regulator SUB1A mediates crosstalk between submergence and drought tolerance in rice

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RNA-Seq Atlas of Glycine max: a guide to the soybean transcriptome

1 reference

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Identification of new up-regulated genes under drought stress in soybean nodules.

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4950259

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4950259

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1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4950259

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4950259

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4950259

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

21 January 2018

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

21 January 2018

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

21 January 2018

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

21 January 2018

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

21 January 2018

Plants and flooding stress

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4950259

31 October 2018

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

21 January 2018

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1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2016.01044

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1 reference

https://pubmed.ncbi.nlm.nih.gov/27486466

12 December 2020

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10.3389/FPLS.2016.01044

1 reference

Europe PubMed Central

26 July 2017

1 reference

Europe PubMed Central

26 July 2017

1 reference

Europe PubMed Central

26 July 2017

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