miR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species (Q33362755)

26 July 2017

miR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species (English)

1 reference

26 July 2017

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F Sabot

2

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Yves Vigouroux

object named as

Y Vigouroux

4

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author name string

K N Ta

1

1 reference

26 July 2017

H Adam

3

1 reference

26 July 2017

S De Mita

5

1 reference

26 July 2017

A Ghesquière

6

1 reference

26 July 2017

N V Do

7

1 reference

26 July 2017

P Gantet

8

1 reference

26 July 2017

S Jouannic

9

1 reference

26 July 2017

12 March 2016

1 reference

26 July 2017

1 reference

26 July 2017

9

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26 July 2017

1

1 reference

26 July 2017

10

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Creative Commons Attribution 4.0 International

26 July 2017

start time

12 March 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1186/s12284-016-0082-9

0 references

cites work

A dynamic evolutionary and functional landscape of plant phased small interfering RNAs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Spatiotemporally dynamic, cell-type-dependent premeiotic and meiotic phasiRNAs in maize anthers.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Genome-wide screening and functional analysis identify a large number of long noncoding RNAs involved in the sexual reproduction of rice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Rapid diversification of five Oryza AA genomes associated with rice adaptation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Transcriptome population genomics reveals severe bottleneck and domestication cost in the African rice (Oryza glaberrima).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Control of grass inflorescence form by the fine-tuning of meristem phase change.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Meristem maturation and inflorescence architecture--lessons from the Solanaceae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Molecular control of grass inflorescence development.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Identification of phasiRNAs in wild rice (Oryza rufipogon)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Biogenesis and function of rice small RNAs from non-coding RNA precursors.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Rice LHS1/OsMADS1 controls floret meristem specification by coordinated regulation of transcription factors and hormone signaling pathways

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

A map of rice genome variation reveals the origin of cultivated rice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

MicroRNA regulation of plant innate immune receptors.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Rate of meristem maturation determines inflorescence architecture in tomato

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Roles of DCL4 and DCL3b in rice phased small RNA biogenesis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Domestication of transposable elements into MicroRNA genes in plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Divergent expression patterns of miR164 and CUP-SHAPED COTYLEDON genes in palms and other monocots: implication for the evolution of meristem function in angiosperms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

miRBase: integrating microRNA annotation and deep-sequencing data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Sequence variation and selection of small RNAs in domesticated rice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Clusters and superclusters of phased small RNAs in the developing inflorescence of rice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Evolution and development of virtual inflorescences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Protocol: a highly sensitive RT-PCR method for detection and quantification of microRNAs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Genome-wide patterns of nucleotide polymorphism in domesticated rice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Evolution and development of inflorescence architectures.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

MicroRNAS and their regulatory roles in plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

microRNA-directed phasing during trans-acting siRNA biogenesis in plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

African rice (Oryza glaberrima): history and future potential

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

leafy hull sterile1 is a homeotic mutation in a rice MADS box gene affecting rice flower development

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

EMBOSS: the European Molecular Biology Open Software Suite

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Transcriptional regulators and the evolution of plant form.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Quantitative RT-PCR: limits and accuracy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Basic local alignment search tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Functional conservation and diversification of class E floral homeotic genes in rice (Oryza sativa).

21 June 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

Rice germline-specific Argonaute MEL1 protein binds to phasiRNAs generated from more than 700 lincRNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

Oryza sativa dicer-like4 reveals a key role for small interfering RNA silencing in plant development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

Cutadapt removes adapter sequences from high-throughput sequencing reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

Two small regulatory RNAs establish opposing fates of a developmental axis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

A germ cell specific gene of the ARGONAUTE family is essential for the progression of premeiotic mitosis and meiosis during sporogenesis in rice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

An extensive analysis of the African rice genetic diversity through a global genotyping

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

Differential expression of the microRNAs in superior and inferior spikelets in rice (Oryza sativa).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

A microRNA superfamily regulates nucleotide binding site-leucine-rich repeats and other mRNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

The evolving story of rice evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

Genome sequencing and analysis of the model grass Brachypodium distachyon

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

MicroRNA superfamilies descended from miR390 and their roles in secondary small interfering RNA Biogenesis in Eudicots

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

Small RNAs from MITE-derived stem-loop precursors regulate abscisic acid signaling and abiotic stress responses in rice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12284-016-0082-9

Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4788661

Genomic dissection of small RNAs in wild rice (Oryza rufipogon): lessons for rice domestication

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26969003

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genetic diversity and domestication history of African rice (Oryza glaberrima) as inferred from multiple gene sequences

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26969003

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12284-016-0082-9

1 reference

Dimensions Publication ID

26 July 2017

0 references

1 reference

26 July 2017

1 reference