BioWarehouse: a bioinformatics database warehouse toolkit (Q33237374)

24 July 2017

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title

BioWarehouse: a bioinformatics database warehouse toolkit (English)

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24 July 2017

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7

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24 July 2017

Yannick Pouliot

2

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author name string

Thomas J Lee

1

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24 July 2017

Valerie Wagner

3

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24 July 2017

Priyanka Gupta

4

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24 July 2017

David W J Stringer-Calvert

5

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24 July 2017

Jessica D Tenenbaum

6

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24 July 2017

23 March 2006

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24 July 2017

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24 July 2017

7

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24 July 2017

170

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describes a project that uses

24 July 2017

SQL

1 reference

26 June 2022

https://europepmc.org/article/PMC/PMC1444936

based on heuristic

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-7-170

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cites work

Atlas - a data warehouse for integrative bioinformatics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

Call for an enzyme genomics initiative

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

EnsMart: a generic system for fast and flexible access to biological data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

BioSPICE: access to the most current computational tools for biologists

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

MetaCyc: a multiorganism database of metabolic pathways and enzymes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

The Molecular Biology Database Collection: 2004 update

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

An ontology for biological function based on molecular interactions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

TAMBIS: transparent access to multiple bioinformatics information sources

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

Gene ontology: tool for the unification of biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

The ENZYME database in 2000

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

KEGG: kyoto encyclopedia of genes and genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

Database resources of the National Center for Biotechnology Information.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

Kleisli: a new tool for data integration in biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

A strategy for database interoperation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

Challenges in integrating biological data sources

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

Prototype implementation of the integrated genomic database

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

From Annotated Genomes to Metabolic Flux Models and Kinetic Parameter Fitting

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

The Comprehensive Microbial Resource.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1444936

Heterogeneous molecular biology databases

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16556315

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genome informatics I: community databases

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16556315

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-7-170

1 reference

journals/bmcbi/LeePWGSTK06

24 July 2017

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DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

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1 reference

24 July 2017

1 reference