Phospho-tyrosine dependent protein-protein interaction network (Q24324740)

protein-protein interaction

GOA release 2020-03-11

1 reference

Ulrich Stelzl

7

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author name string

Arndt Grossmann

1

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Nouhad Benlasfer

2

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Petra Birth

3

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Anna Hegele

4

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Franziska Wachsmuth

5

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Luise Apelt

Molecular Systems Biology

6

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language of work or name

English

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publication date

March 2015

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published in

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volume

11

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page(s)

794

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issue

3

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describes a project that uses

Cytoscape

object named as

Cytoscape

2 references

Europe PubMed Central

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

A proteome-scale map of the human interactome network

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A secreted tyrosine kinase acts in the extracellular environment

19 March 2017

1 reference

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A Y2H-seq approach defines the human protein methyltransferase interactome

19 March 2017

1 reference

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Dynamic protein-protein interaction wiring of the human spliceosome

19 March 2017

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PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse

19 March 2017

1 reference

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A directed protein interaction network for investigating intracellular signal transduction

19 March 2017

1 reference

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Selected reaction monitoring mass spectrometry reveals the dynamics of signaling through the GRB2 adaptor

19 March 2017

1 reference

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Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis

19 March 2017

1 reference

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Targeting the PI3K signaling pathway in cancer

19 March 2017

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An empirical framework for binary interactome mapping

19 March 2017

1 reference

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Application of active and kinase-deficient kinome collection for identification of kinases regulating hedgehog signaling

19 March 2017

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A human protein-protein interaction network: a resource for annotating the proteome

19 March 2017

1 reference

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A census of human cancer genes

19 March 2017

1 reference

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High Resolution Crystal Structure of the Grb2 SH2 Domain with a Phosphopeptide Derived from CD28

19 March 2017

1 reference

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Structural basis for specificity of Grb2-SH2 revealed by a novel ligand binding mode

19 March 2017

1 reference

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SH2 domains recognize specific phosphopeptide sequences

19 March 2017

1 reference

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Temporal regulation of EGF signalling networks by the scaffold protein Shc1

19 March 2017

1 reference

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Phosphotyrosine signaling proteins that drive oncogenesis tend to be highly interconnected

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

The language of SH2 domain interactions defines phosphotyrosine-mediated signal transduction

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Defining the specificity space of the human SRC homology 2 domain

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

The human and mouse complement of SH2 domain proteins-establishing the boundaries of phosphotyrosine signaling

19 March 2017

1 reference

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Oncogenic kinase signalling

19 March 2017

1 reference

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Interaction of wild type and dominant-negative p55PIK regulatory subunit of phosphatidylinositol 3-kinase with insulin-like growth factor-1 signaling proteins

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Interactome networks and human disease

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Reading protein modifications with interaction domains

7 April 2017

1 reference

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Linear Motif Atlas for Phosphorylation-Dependent Signaling

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Systematic Discovery of In Vivo Phosphorylation Networks

10 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

A massively parallel pipeline to clone DNA variants and examine molecular phenotypes of human disease mutations

10 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

TSPAN2 is involved in cell invasion and motility during lung cancer progression.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Studying post-translational modifications with protein interaction networks

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Tetraspanin proteins promote multiple cancer stages

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

CD151 in cancer progression and metastasis: a complex scenario.

27 September 2017

1 reference

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Molecular interaction networks in the analyses of sequence variation and proteomics data

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

The SH2 domain interaction landscape

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Dual coordination of post translational modifications in human protein networks

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

The ConsensusPathDB interaction database: 2013 update

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Morphology and migration of podocytes are affected by CD151 levels

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Differential network biology

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

PKA regulatory subunits mediate synergy among conserved G-protein-coupled receptor cascades.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

The C-terminal tail of tetraspanin protein CD9 contributes to its function and molecular organization

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

The tetraspanin CD151 is required for Met-dependent signaling and tumor cell growth

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Native type IV collagen induces cell migration through a CD9 and DDR1-dependent pathway in MDA-MB-231 breast cancer cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

An experimentally derived confidence score for binary protein-protein interactions

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

The tetraspanin CD151 regulates cell morphology and intracellular signaling on laminin-511.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

The tetraspanin CD9 modulates epidermal growth factor receptor signaling in cancer cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Functional implications of tetraspanin proteins in cancer biology

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Universal strategies in research and drug discovery based on protein-fragment complementation assays

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Genetic screening for signal transduction in the era of network biology

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Src homology 2 domain-based high throughput assays for profiling downstream molecules in receptor tyrosine kinase pathways

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

CD151 forms a functional complex with c-Met in human salivary gland cancer cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

CD9-mediated activation of the p46 Shc isoform leads to apoptosis in cancer cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

SH2 and PTB domains in tyrosine kinase signaling

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Molecular recognition by SH2 domains

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Point mutations in the abl SH2 domain coordinately impair phosphotyrosine binding in vitro and transforming activity in vivo

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

IRS-1 activates phosphatidylinositol 3'-kinase by associating with src homology 2 domains of p85

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Phosphotyrosine signaling: evolving a new cellular communication system

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Edgetic perturbation models of human inherited disorders

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

The ADE2 gene from Saccharomyces cerevisiae: sequence and new vectors

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

A stringent yeast two-hybrid matrix screening approach for protein-protein interaction discovery.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Comparative analysis reveals conserved protein phosphorylation networks implicated in multiple diseases

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

ZIP codes for delivering SH2 domains

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4380928

Interaction of Wild Type and Dominant-Negative p55PIKRegulatory Subunit of Phosphatidylinositol 3-Kinase with Insulin-Like Growth Factor-1 Signaling Proteins

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25814554