Systematic identification of molecular links between core and candidate genes in breast cancer (Q24317056)

Andreas Zanzoni

3

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Travis H Stracker

Travis H Stracker

6

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Patrick Aloy

Patrick Aloy

8

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Miquel Duran-Frigola

4

Miquel Duran-Frigola

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author name string

Guillermo Suñé

2

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Víctor Alcalde

5

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Montserrat Soler-López

Journal of Molecular Biology

7

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language of work or name

English

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publication date

27 March 2015

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published in

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volume

427

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page(s)

1436-50

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issue

6 Pt B

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cites work

Identification of new genes associated with breast cancer progression by gene expression analysis of predefined sets of neoplastic tissues

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

From protein interaction networks to novel therapeutic strategies

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Xrcc3 is recruited to DNA double strand breaks early and independent of Rad51.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Human Protein Reference Database and Human Proteinpedia as discovery tools for systems biology.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

A human protein-protein interaction network: a resource for annotating the proteome

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

A proteome-scale map of the human interactome network

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Taking the time to make important decisions: the checkpoint effector kinases Chk1 and Chk2 and the DNA damage response

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

A network medicine approach to human disease

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

A protein interaction network links GIT1, an enhancer of huntingtin aggregation, to Huntington's disease

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Regulation of homologous recombination by RNF20-dependent H2B ubiquitination.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Requirement of ATM-dependent monoubiquitylation of histone H2B for timely repair of DNA double-strand breaks

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Deconstructing the molecular portraits of breast cancer

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Human DNA repair genes, 2005.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Low duplicability and network fragility of cancer genes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

The p53 network: cellular and systemic DNA damage responses in aging and cancer

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Unveiling the role of network and systems biology in drug discovery

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

MTA3, a Mi-2/NuRD complex subunit, regulates an invasive growth pathway in breast cancer

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Molecular portraits of human breast tumours

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Towards a proteome-scale map of the human protein–protein interaction network

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

1 reference

7 January 2021

Molecular networks as sensors and drivers of common human diseases

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

The DNA damage response and cancer therapy

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Network modeling links breast cancer susceptibility and centrosome dysfunction

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

A tumor suppressor function of Smurf2 associated with controlling chromatin landscape and genome stability through RNF20.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

IntOGen: integration and data mining of multidimensional oncogenomic data

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

An empirical framework for binary interactome mapping

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

An experimentally derived confidence score for binary protein-protein interactions

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Next-generation sequencing to generate interactome datasets

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Large-scale high-efficiency yeast transformation using the LiAc/SS carrier DNA/PEG method

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Modelling breast cancer: one size does not fit all.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

1 reference

7 January 2021

PARP inhibition: PARP1 and beyond

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Histological and molecular types of breast cancer: is there a unifying taxonomy?

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

The MRE11 complex: starting from the ends.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Breast cancer genome-wide association studies: there is strength in numbers

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Disrupted in Schizophrenia 1 Interactome: evidence for the close connectivity of risk genes and a potential synaptic basis for schizophrenia

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Melanoma differentiation associated gene-7, mda-7/IL-24, selectively induces growth suppression, apoptosis and radiosensitization in malignant gliomas in a p53-independent manner

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

DNA Damage, Aging, and Cancer

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Triple-Negative Breast Cancer

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

The human disease network

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

ANCCA, an estrogen-regulated AAA+ ATPase coactivator for ERalpha, is required for coregulator occupancy and chromatin modification

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Comprehensive proteomic analysis of breast cancer cell membranes reveals unique proteins with potential roles in clinical cancer

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Role of RAD51C and XRCC3 in genetic recombination and DNA repair.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

RAD51C facilitates checkpoint signaling by promoting CHK2 phosphorylation

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Mendelian Inheritance in Man and its online version, OMIM

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Regulation of double-strand break-induced mammalian homologous recombination by UBL1, a RAD51-interacting protein

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

TissueInfo: high-throughput identification of tissue expression profiles and specificity

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

An efficient algorithm for large-scale detection of protein families

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

IntAct: an open source molecular interaction database

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

The Database of Interacting Proteins: 2004 update

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

ORFDB: an information resource linking scientific content to a high-quality Open Reading Frame (ORF) collection

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

The BioGRID Interaction Database: 2008 update

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Reactome knowledgebase of human biological pathways and processes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

G-SESAME: web tools for GO-term-based gene similarity analysis and knowledge discovery

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

The IntAct molecular interaction database in 2010

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

MINT, the molecular interaction database: 2009 update

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

MINT, the molecular interaction database: 2012 update

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

COXPRESdb: a database of comparative gene coexpression networks of eleven species for mammals.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Interactome mapping suggests new mechanistic details underlying Alzheimer's disease

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

The modular nature of genetic diseases.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Aberrant expression of the transcription factors snail and slug alters the response to genotoxic stress

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Genetic predisposition to breast cancer: past, present, and future

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Markov clustering versus affinity propagation for the partitioning of protein interaction graphs

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Oncomine 3.0: genes, pathways, and networks in a collection of 18,000 cancer gene expression profiles

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

Yeast two-hybrid, a powerful tool for systems biology

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021

mda-7(IL-24) Inhibits Growth and Enhances Radiosensitivity of Glioma Cells In Vitro via JNK Signaling

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.01.014

7 January 2021