Evaluating support for the current classification of eukaryotic diversity (Q21090155)

https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.0020220

8 August 2022

Debashish Bhattacharya

5

Debashish

Bhattacharya

Debashish Bhattacharya

1 reference

8 August 2022

Erika Barbero

2

Erika

Barbero

1 reference

8 August 2022

language of work or name

English

0 references

publication date

December 2006

0 references

full work available at URL

https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.0020220

0 references

published in

PLOS Genetics

0 references

volume

2

0 references

issue

12

0 references

page(s)

e220

0 references

copyright license

Creative Commons Attribution 4.0 International

start time

1 January 2006

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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12 September 2017

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12 September 2017

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12 September 2017

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12 September 2017

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12 September 2017

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12 September 2017

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12 September 2017

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Microsporidia: accumulating molecular evidence that a group of amitochondriate and suspectedly primitive eukaryotes are just curious fungi

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The Diversity of Eukaryotes

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12 September 2017

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Revised small subunit rRNA analysis provides further evidence that Foraminifera are related to Cercozoa

27 September 2017

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30 May 2018

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Reconstructing Early Events in Eukaryotic Evolution

30 May 2018

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30 May 2018

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Ultrastructure as a Control for Protistan Molecular Phylogeny

30 May 2018

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Tracing the Thread of Plastid Diversity through the Tapestry of Life.

30 May 2018

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Single, ancient origin of a plastid metabolite translocator family in Plantae from an endomembrane-derived ancestor

19 June 2018

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The complete plastid genome sequence of the haptophyte Emiliania huxleyi: a comparison to other plastid genomes.

29 November 2018

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29 November 2018

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Inference of the phylogenetic position of oxymonads based on nine genes: support for metamonada and excavata.

29 November 2018

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Monophyly of primary photosynthetic eukaryotes: green plants, red algae, and glaucophytes.

29 November 2018

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The systematic component of phylogenetic error as a function of taxonomic sampling under parsimony

29 November 2018

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More Genes or More Taxa? The Relative Contribution of Gene Number and Taxon Number to Phylogenetic Accuracy

29 November 2018

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29 November 2018

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Phylogenetic artifacts can be caused by leucine, serine, and arginine codon usage heterogeneity: dinoflagellate plastid origins as a case study

29 November 2018

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Identity of the mtDNA haplotype(s) of Phytophthora infestans in historical specimens from the Irish potato famine

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

Actin and ubiquitin protein sequences support a cercozoan/foraminiferan ancestry for the plasmodiophorid plant pathogens.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

Covarion shifts cause a long-branch attraction artifact that unites microsporidia and archaebacteria in EF-1alpha phylogenies.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

Phylogenetic analysis of eukaryotes using heat-shock protein Hsp90.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

Foraminifera and Cercozoa share a common origin according to RNA polymerase II phylogenies

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

Origin and phylogeny of chloroplasts revealed by a simple correlation analysis of complete genomes.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

Phylogeny of lobose amoebae based on actin and small-subunit ribosomal RNA genes.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

A Novel Polyubiquitin Structure in Cercozoa and Foraminifera: Evidence for a New Eukaryotic Supergroup

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

Testing for differences in rates-across-sites distributions in phylogenetic subtrees.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

Mathematical elegance with biochemical realism: the covarion model of molecular evolution.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

Foraminifera and Cercozoa are related in actin phylogeny: two orphans find a home?

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

Phylogeny of eukaryotes based on ribosomal RNA: long-branch attraction and models of sequence evolution.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

The origin of red algae and the evolution of chloroplasts.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

The rooting of the universal tree of life is not reliable.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

Single gene circles in dinoflagellate chloroplast genomes.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

The actin gene of the glaucocystophyte Cyanophora paradoxa: analysis of the coding region and introns, and an actin phylogeny of eukaryotes.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1713255

Taxonomic sampling, phylogenetic accuracy, and investigator bias

29 November 2018

1 reference

12 December 2020

A plastid in the making: evidence for a second primary endosymbiosis

1 reference

12 December 2020

Are Ichthyosporea animals or fungi? Bayesian phylogenetic analysis of elongation factor 1α of Ichthyophonus irregularis

1 reference

12 December 2020

Minimal plastid genome evolution in the Paulinella endosymbiont

1 reference

12 December 2020

10.1371/JOURNAL.PGEN.0020220

Identifiers

DOI

1 reference

1318687

1318687

1 reference

1 reference

1 reference