Wikidata:Property proposal/phosphorylates

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can phosphorylate[edit]

Originally proposed at Wikidata:Property proposal/Natural science

   Not done
DescriptionProperty of kinase proteins to add phosphate to target substrate proteins.
Representsprotein phosphorylation (Q7251493))
Data typeItem
Domaininstances of protein (Q8054)
Allowed valuesinstances of protein (Q8054)
Example 1CAMK1 (Q18033081)CAMP responsive element binding protein 1 (Q21116771) Ref: UniProt
Example 2CAMK1 (Q18033081)Eukaryotic translation initiation factor 4 gamma 3 (Q21108761) Ref: UniProt
Example 3Cyclin dependent kinase 2 (Q511968)RB transcriptional corepressor 1 (Q21111463) Ref: ṔMC49822
Example 4Mitogen-activated protein kinase kinase kinase 1 (Q21170755)Mitogen-activated protein kinase kinase 7 (Q21109744) Ref Reactome
SourceMany databases available with different degrees of curation. Examples include data reported in UniProt, phosphonetworks and X2K.
Planned useManually assign major biological relations of kinases and their targets. Sift throught the literature to find reliable sources for future migration to wikidata.

Motivation[edit]

Protein phosphorylation is central to biological signal transduction. Basic cell biology in undergraduate textbook includes diverse protein phosphorylation cascades. Modelling this property allow us to bring knowledge regarding kinases and their targets to wikidata. This can be done both manually, citing the scientific literature, or in batches using curated databases.

TiagoLubiana (talk) 04:48, 15 June 2019 (UTC)

Discussion[edit]


Andrew Su
Marc Robinson-Rechavi
Pierre Lindenbaum
Michael Kuhn
Boghog
Emw
Chandres
Dan Bolser
Pradyumna
Chinmay
Timo Willemsen
Salvatore Loguercio
Tobias1984
Daniel Mietchen
Optimale
Mcnabber091
Ben Moore
Alex Bateman
Klortho
Hypothalamus
Vojtěch Dostál
Gtsulab
Andra Waagmeester
Sebotic
Mvolz
Toniher
Elvira Mitraka
David Bikard
Dan Lawson
Francesco Sirocco
Konrad U. Förstner (talk)
Chris Mungall (talk)
Kristina Hettne
Hardwigg
i9606
Putmantime
Tinm
Karima Rafes
Finn Årup Nielsen
Jasper Koehorst
Till Sauerwein
Crowegian
Nothingserious
Okkn
AlexanderPico
Amos Bairoch
Gstupp
DePiep
Was a bee
SarahKeating
Muhammad Elhossary
Ptolusque
Netha
Damian Szklarczyk
Kpjas
Thibdx
Juliansteinb
TiagoLubiana
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