Wikidata:Property proposal/dbSNP ID

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dbSNP ID[edit]

Originally proposed at Wikidata:Property proposal/Natural science

   Done: dbSNP ID (P6861) (Talk and documentation)
DescriptionIdentifier used in dbSNP to uniquely identify a genetic variant
Representssequence variant (Q15304597)
Data typeExternal identifier
Example 1BRAF V600E (Q21851559)rs113488022
Example 2BRAF G469E (Q56240908) → rs121913355
Example 3BRAF G606E (Q50092870) → rs1488384581
Example 4BRAF G469E (Q56240908) → rs121913355
Sourcehttps://civicdb.org/home
Planned useWe plan to extend our current bot that synchronizes CIViCdb with this property.
Expected completenessFor all existing DBSNPs always incomplete (Q21873886) for those referenced in the CIViCdb eventually complete (Q21873974)
Formatter URLhttps://www.ncbi.nlm.nih.gov/snp/$1
Robot and gadget jobsTo run with ProteinBoxBot

Motivation[edit]

Since 2017 we are regularly synchronizing CIViCdb with Wikidata. CIViC does contain references to dbSNP which would be a valuable extension to our bot and the external reference to genetic variants currently captured in Wikidata Andrawaag (talk) 19:45, 6 June 2019 (UTC)

Discussion[edit]