Evaluation of NCI-7 Cell Line Panel as a Reference Material for Clinical Proteomics (Q53530653)

15 May 2018

http://europepmc.org/abstract/MED/29718670

title

Evaluation of NCI-7 Cell Line Panel as a Reference Material for Clinical Proteomics (English)

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15 May 2018

http://europepmc.org/abstract/MED/29718670

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1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6670293&resulttype=core&format=json

16 May 2020

Yingwei Hu

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6670293&resulttype=core&format=json

16 May 2020

author name string

William Bocik

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6670293&resulttype=core&format=json

16 May 2020

Lijun Chen

4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6670293&resulttype=core&format=json

16 May 2020

Michael Schnaubelt

5

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6670293&resulttype=core&format=json

16 May 2020

Rhonda Roberts

6

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6670293&resulttype=core&format=json

16 May 2020

Punit Shah

7

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6670293&resulttype=core&format=json

16 May 2020

Gordon Whiteley

8

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6670293&resulttype=core&format=json

16 May 2020

Hui Zhang

9

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6670293&resulttype=core&format=json

16 May 2020

publication date

2 May 2018

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15 May 2018

http://europepmc.org/abstract/MED/29718670

language of work or name

English

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published in

Journal of Proteome Research

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16 May 2020

volume

17

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16 May 2020

issue

6

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16 May 2020

page(s)

2205-2215

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describes a project that uses

16 May 2020

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Profiling core proteomes of human cell lines by one-dimensional PAGE and liquid chromatography-tandem mass spectrometry

1 reference

12 December 2020

Proteomic profiling of the NCI-60 cancer cell lines using new high-density reverse-phase lysate microarrays

1 reference

12 December 2020

The NCI60 human tumour cell line anticancer drug screen

1 reference

12 December 2020

Mutation analysis of 24 known cancer genes in the NCI-60 cell line set.

1 reference

12 December 2020

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

1 reference

12 December 2020

Transcript and protein expression profiles of the NCI-60 cancer cell panel: an integromic microarray study.

1 reference

12 December 2020

The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools

1 reference

12 December 2020

Changing medium and passaging cell lines

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12 December 2020

Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases

1 reference

12 December 2020

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

1 reference

12 December 2020

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

1 reference

12 December 2020

Evaluation of the variation in sample preparation for comparative proteomics using stable isotope labeling by amino acids in cell culture

1 reference

12 December 2020

CellMiner: a relational database and query tool for the NCI-60 cancer cell lines

1 reference

12 December 2020

Interlaboratory study characterizing a yeast performance standard for benchmarking LC-MS platform performance.

1 reference

12 December 2020

Signatures of mutation and selection in the cancer genome

1 reference

12 December 2020

The landscape of somatic copy-number alteration across human cancers

1 reference

12 December 2020

Exon array analyses across the NCI-60 reveal potential regulation of TOP1 by transcription pausing at guanosine quartets in the first intron

1 reference

12 December 2020

Genome remodelling in a basal-like breast cancer metastasis and xenograft

1 reference

12 December 2020

mRNA and microRNA expression profiles of the NCI-60 integrated with drug activities

1 reference

12 December 2020

Guidelines for the welfare and use of animals in cancer research

1 reference

12 December 2020

Design considerations for proteomic reference materials

1 reference

12 December 2020

Tumor grafts derived from women with breast cancer authentically reflect tumor pathology, growth, metastasis and disease outcomes

1 reference

12 December 2020

Comparative proteomic analysis of eleven common cell lines reveals ubiquitous but varying expression of most proteins

1 reference

12 December 2020

CellMiner: A Web-Based Suite of Genomic and Pharmacologic Tools to Explore Transcript and Drug Patterns in the NCI-60 Cell Line Set

1 reference

12 December 2020

A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis

1 reference

12 December 2020

Sources of technical variability in quantitative LC-MS proteomics: human brain tissue sample analysis

1 reference

12 December 2020

Integrated proteomic analysis of post-translational modifications by serial enrichment.

1 reference

12 December 2020

The exomes of the NCI-60 panel: a genomic resource for cancer biology and systems pharmacology

1 reference

12 December 2020

Global proteome analysis of the NCI-60 cell line panel

1 reference

12 December 2020

Endocrine-therapy-resistant ESR1 variants revealed by genomic characterization of breast-cancer-derived xenografts

1 reference

12 December 2020

ProteomeXchange provides globally coordinated proteomics data submission and dissemination

1 reference

12 December 2020

A pan-cancer proteomic perspective on The Cancer Genome Atlas.

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12 December 2020

Proteogenomic characterization of human colon and rectal cancer

1 reference

12 December 2020

Isobaric Labeling-Based Relative Quantification in Shotgun Proteomics

1 reference

12 December 2020

MS-GF+ makes progress towards a universal database search tool for proteomics

1 reference

12 December 2020

Pan-cancer network analysis identifies combinations of rare somatic mutations across pathways and protein complexes

1 reference

12 December 2020

Patient-derived xenograft models of breast cancer and their predictive power

1 reference

12 December 2020

Examining the utility of patient-derived xenograft mouse models

1 reference

12 December 2020

Patient-derived cell models as preclinical tools for genome-directed targeted therapy

1 reference

12 December 2020

Minimizing technical variation during sample preparation prior to label-free quantitative mass spectrometry

1 reference

12 December 2020

Reproducibility of Differential Proteomic Technologies in CPTAC Fractionated Xenografts

1 reference

12 December 2020

NCI-60 Cell Line Screening: A Radical Departure in its Time

1 reference

12 December 2020

A Description of the Clinical Proteomic Tumor Analysis Consortium (CPTAC) Common Data Analysis Pipeline

1 reference

12 December 2020

Oncogenic KRAS Regulates Tumor Cell Signaling via Stromal Reciprocation.

1 reference

12 December 2020

Proteogenomics connects somatic mutations to signalling in breast cancer

1 reference

12 December 2020

Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer.

1 reference

12 December 2020

The NCI-60 Methylome and Its Integration into CellMiner

1 reference

12 December 2020

Expanding Proteome Coverage with CHarge Ordered Parallel Ion aNalysis (CHOPIN) Combined with Broad Specificity Proteolysis.

1 reference

12 December 2020

A computational modelling framework to quantify the effects of passaging cell lines.

1 reference

12 December 2020

Quality Assessments of Long-Term Quantitative Proteomic Analysis of Breast Cancer Xenograft Tissues.

1 reference

12 December 2020

The Cancer Genome Atlas Pan-Cancer analysis project

1 reference

31 March 2022

https://opencitations.net/index/coci/api/v1/citations/10.1038/NG.2764

Identifiers

DOI

10.1021/ACS.JPROTEOME.8B00165

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6670293&resulttype=core&format=json

16 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6670293&resulttype=core&format=json

16 May 2020

1 reference