NetOglyc: prediction of mucin type O-glycosylation sites based on sequence context and surface accessibility (Q52244892)

28 April 2018

title

NetOglyc: prediction of mucin type O-glycosylation sites based on sequence context and surface accessibility (English)

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28 April 2018

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6

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28 April 2018

author name string

J E Hansen

1

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28 April 2018

O Lund

2

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28 April 2018

N Tolstrup

3

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28 April 2018

A A Gooley

4

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28 April 2018

K L Williams

5

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28 April 2018

publication date

1 February 1998

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28 April 2018

language of work or name

English

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published in

Glycoconjugate Journal

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28 April 2018

volume

15

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28 April 2018

issue

2

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28 April 2018

page(s)

115-130

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28 April 2018

Prediction of O-glycosylation of mammalian proteins: specificity patterns of UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase

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Amino acid sequence and oligosaccharide attachment sites of the glycosylated domain of dog erythrocyte glycophorin

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Selection of representative protein data sets

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Structural requirements for addition of O-linked carbohydrate to recombinant erythropoietin

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A family of UDP-GalNAc: polypeptide N-acetylgalactosaminyl-transferases control the initiation of mucin-type O-linked glycosylation

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Purification and cDNA Cloning of a Human UDP-N-acetyl-α- D-galactosamine:polypeptide N-Acetylgalactosaminyltransferase

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O-Glycosylation of the Thr70 Residue of Cell-Adhesive Lysozyme in Yeast

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12 December 2020

Structures and functional roles of the sugar chains of human erythropoietins

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12 December 2020

The acceptor substrate specificity of porcine submaxillary UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase is dependent on the amino acid sequences adjacent to serine and threonine residues

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12 December 2020

Amino acid sequence and attachment sites of oligosaccharide units of porcine erythrocyte glycophorin

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12 December 2020

Hepatocyte growth factor is linked by O-glycosylated oligosaccharide on the alpha chain

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12 December 2020

cDNA cloning and expression of a novel human UDP-N-acetyl-alpha-D-galactosamine. Polypeptide N-acetylgalactosaminyltransferase, GalNAc-t3

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Characterization of the B-chain of human plasma alpha 2HS-glycoprotein. The complete amino acid sequence and primary structure of its heteroglycan

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Cooperativity of carbohydrate moiety orientation and beta-turn stability is determined by intramolecular hydrogen bonds in protected glycopeptide models

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Protein secondary structure prediction with a neural network

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Glycosylation of human apolipoprotein E. The carbohydrate attachment site is threonine 194.

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12 December 2020

Studies on the order and site specificity of GalNAc transfer to MUC1 tandem repeats by UDP-GalNAc: polypeptide N-acetylgalactosaminyltransferase from milk or mammary carcinoma cells

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12 December 2020

Serum "big insulin-like growth factor II" from patients with tumor hypoglycemia lacks normal E-domain O-linked glycosylation, a possible determinant of normal propeptide processing

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12 December 2020

Glycosylation sites identified by solid-phase Edman degradation: O-linked glycosylation motifs on human glycophorin A

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12 December 2020

T-cell-specific deletion of a polypeptide N-acetylgalactosaminyl-transferase gene by site-directed recombination

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12 December 2020

An O-linked carbohydrate neutralization epitope of HIV-1 gp 120 is expressed by HIV-1 env gene recombinant vaccinia virus

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12 December 2020

Enzymic O-glycosylation of synthetic peptides from sequences in basic myelin protein

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12 December 2020

The influence of flanking sequences on O-glycosylation.

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12 December 2020

The amino acid sequence of human chorionic gonadotropin. The alpha subunit and beta subunit

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12 December 2020

Prediction of beta-turns in proteins using neural networks

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12 December 2020

Cell surface mucin-type glycoproteins and mucin-like domains

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12 December 2020

Natural human interferon-alpha 2 is O-glycosylated

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12 December 2020

Structure of recombinant human interleukin 5 produced by Chinese hamster ovary cells

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12 December 2020

Cloning and expression of mouse UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-T3.

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12 December 2020

Reinvestigation of the disulfide bridge arrangement in human pro-opiomelanocortin N-terminal segment (hNT 1-76)

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12 December 2020

Glycosidase digestion, electrophoresis and chromatographic analysis of recombinant human granulocyte colony-stimulating factor glycoforms produced in Chinese hamster ovary cells

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12 December 2020

Amino acid sequence of the light chain of human high molecular mass kininogen

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The structures of the carbohydrate moieties of bovine blood coagulation factor X.

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12 December 2020

The complete amino acid sequence of alanine apolipoprotein (apoC-3), and apolipoprotein from human plasma very low density lipoproteins

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12 December 2020

Localization of an O-glycosylation site in the alpha-subunit of the human platelet integrin GPIIb/IIIa involved in Baka (HPA-3a) alloantigen expression

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Kunitz-Type Proteinase Inhibitors Derived by Limited Proteolysis of the Inter-α-Trypsin Inhibitor, V[1–4]. Attachments of Carbohydrates in the Human Urinary Trypsin Inhibitor Isolated by Affinity Chromatography

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Comparison of the predicted and observed secondary structure of T4 phage lysozyme

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Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

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Complete amino acid sequence of a human pituitary glycopeptide: an important maturation product of pro-opiomelanocortin

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Amino acid sequence of human plasma galactoglycoprotein: identity with the extracellular region of CD43 (sialophorin)

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Sensitivity of HIV-1 to neutralization by antibodies against O-linked carbohydrate epitopes despite deletion of O-glycosylation signals in the V3 loop

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12 December 2020

Inhibition of human immunodeficiency virus (HIV) infection in vitro by anticarbohydrate monoclonal antibodies: peripheral glycosylation of HIV envelope glycoprotein gp120 may be a target for virus neutralization

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Predicting the secondary structure of globular proteins using neural network models

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12 December 2020

Amino acid sequence of the von Willebrand factor-binding domain of platelet membrane glycoprotein Ib

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12 December 2020

Purification, cloning, and expression of a bovine UDP-GalNAc: polypeptide N-acetyl-galactosaminyltransferase.

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12 December 2020

A comparison of serine and threonine O-glycosylation by UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase

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12 December 2020

Characterization of antisera distinguishing carbohydrate structures in the beta-carboxyl-terminal region of human chorionic gonadotropin

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12 December 2020

Human urinary kallikrein: amino acid sequence and carbohydrate attachment sites

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12 December 2020

Influence of acceptor substrate primary amino acid sequence on the activity of human UDP-N-acetylgalactosamine:polypeptide N-acetylgalactosaminyltransferase. Studies with the MUC1 tandem repeat

1 reference

12 December 2020

Presence of O-linked oligosaccharide on a threonine residue in the human transferrin receptor

1 reference

12 December 2020

Using the FASTA program to search protein and DNA sequence databases.

1 reference

12 December 2020

Isolation and Characterization of Human Milk Bile Salt-Activated Lipase C-Tail Fragment

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12 December 2020

Subcellular localization of the UDP-N-acetyl-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase-mediated O-glycosylation reaction in the submaxillary gland

1 reference

12 December 2020

Amino acid sequence of monkey erythrocyte glycophorin MK. Its amino acid sequence has a striking homology with that of human glycophorin A

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12 December 2020

Site-specific detection and structural characterization of the glycosylation of human plasma proteins lecithin:cholesterol acyltransferase and apolipoprotein D using HPLC/electrospray mass spectrometry and sequential glycosidase digestion

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12 December 2020

PHD--an automatic mail server for protein secondary structure prediction

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12 December 2020

Transmembrane helices predicted at 95% accuracy

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12 December 2020

Charge distribution of flanking amino acids influences O-glycan acquisition in vivo

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12 December 2020

Mapping the mouse ZP3 combining site for sperm by exon swapping and site-directed mutagenesis

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12 December 2020

Influence of quaternary structure on glycosylation. Differential subunit association affects the site-specific glycosylation of the common beta-chain from Mac-1 and LFA-1.

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12 December 2020

cDNA cloning, expression, and chromosomal localization of a human UDP-GalNAc:polypeptide, N-acetylgalactosaminyltransferase

1 reference

12 December 2020

Cleavage site analysis in picornaviral polyproteins: discovering cellular targets by neural networks

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12 December 2020

Glycosylation sites identified by detection of glycosylated amino acids released from Edman degradation: the identification of Xaa-Pro-Xaa-Xaa as a motif for Thr-O-glycosylation

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12 December 2020

Identification of O-linked oligosaccharide chains in the activation peptides of blood coagulation factor X. The role of the carbohydrate moieties in the activation of factor X.

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12 December 2020

Kinetic analysis of a recombinant UDP-N-acetyl-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase

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12 December 2020

Protein secondary structure and homology by neural networks The α-helices in rhodopsin

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12 December 2020

Why are proteins O-glycosylated?

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12 December 2020

The PIR-International databases.

1 reference

12 December 2020

Sequence logos: a new way to display consensus sequences

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12 December 2020

The human MUC2 mucin apoprotein appears to dimerize before O-glycosylation and shares epitopes with the 'insoluble' mucin of rat small intestine

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12 December 2020

Broadly neutralizing antibodies targeted to mucin-type carbohydrate epitopes of human immunodeficiency virus

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12 December 2020

Specificity of O-glycosylation by bovine colostrum UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferase using synthetic glycopeptide substrates

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12 December 2020

Artificial neural networks for pattern recognition in biochemical sequences

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12 December 2020

Mucin-Type Glycoproteins

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12 December 2020

Role of carbohydrate modification in the production and secretion of human granulocyte macrophage colony-stimulating factor in genetically engineered and normal mesenchymal cells

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12 December 2020

Cloning and sequence homology of a rat UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase

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12 December 2020

Primary structure of a human IgA1 immunoglobulin. IV. Streptococcal IgA1 protease, digestion, Fab and Fc fragments, and the complete amino acid sequence of the alpha 1 heavy chain

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12 December 2020

Characterization of O-linked glycosylation motifs in the glycopeptide domain of bovine kappa-casein

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12 December 2020

Amino acid distributions around O-linked glycosylation sites

1 reference

12 December 2020

Purification and characterization of a UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase specific for glycosylation of threonine residues

1 reference

12 December 2020

Specific N-linked and O-linked glycosylation modifications in the envelope V1 domain of simian immunodeficiency virus variants that evolve in the host alter recognition by neutralizing antibodies

1 reference

12 December 2020

Prediction of human mRNA donor and acceptor sites from the DNA sequence

1 reference

12 December 2020

A vector projection method for predicting the specificity of GalNAc-transferase

1 reference

12 December 2020

Cloning and expression of a porcine UDP-GalNAc: polypeptide N-acetylgalactosaminyl transferase

1 reference

12 December 2020

Combining evolutionary information and neural networks to predict protein secondary structure

1 reference

12 December 2020

Human immunodeficiency virus type 1 envelope glycoprotein is modified by O-linked oligosaccharides

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12 December 2020

The complete amino acid sequence of human complex-forming glycoprotein heterogeneous in charge (protein HC) from one individual

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12 December 2020

Identifiers

DOI

10.1023/A:1006960004440

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28 April 2018

Dimensions publication ID

1014575661

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28 April 2018