Finding the genes in genomic DNA (Q47835342)

6 February 2018

title

Finding the genes in genomic DNA (English)

1 reference

https://api.crossref.org/works/10.1016/S0959-440X(98)80069-9

31 December 2024

author name string

C. B. Burge

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9666331

31 December 2024

S. Karlin

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9666331

31 December 2024

publication date

1 June 1998

1 reference

6 February 2018

June 1998

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=9666331

31 December 2024

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=9666331

https://doi.org/10.1016/s0959-440x(98)80069-9

31 December 2024

work available at URL

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9666331

https://api.elsevier.com/content/article/PII:S0959440X98800699?httpAccept=text/xml

31 December 2024

1 reference

https://api.crossref.org/works/10.1016/S0959-440X(98)80069-9

https://api.elsevier.com/content/article/PII:S0959440X98800699?httpAccept=text/plain

31 December 2024

1 reference

https://api.crossref.org/works/10.1016/S0959-440X(98)80069-9

Current Opinion in Structural Biology

31 December 2024

published in

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6 February 2018

volume

8

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6 February 2018

issue

3

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6 February 2018

page(s)

346-354

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6 February 2018

publication type of scholarly work

review article

1 reference

Finding genes by computer: the state of the art.

cites work

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Computational methods for the identification of genes in vertebrate genomic sequences.

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Evaluation of gene structure prediction programs

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Prediction of function in DNA sequence analysis

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A hidden Markov model that finds genes in E. coli DNA

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Microbial gene identification using interpolated Markov models

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Evidence for horizontal gene transfer in Escherichia coli speciation

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Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii

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What drives codon choices in human genes?

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Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences

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Eukaryotic Promoter Recognition

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Predicting Pol II promoter sequences using transcription factor binding sites

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Interpreting cDNA sequences: some insights from studies on translation

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Prediction of complete gene structures in human genomic DNA

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Classification of Introns: U2-Type or U12-Type

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Finding genes in DNA with a Hidden Markov Model

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Improved Splice Site Detection in Genie

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Exon recognition in vertebrate splicing

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Identification of protein coding regions in the human genome by quadratic discriminant analysis

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Assessment of protein coding measures

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The human genome: organization and evolutionary history

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Base composition and gene distribution: critical patterns in mammalian genome organization

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A tutorial on hidden Markov models and selected applications in speech recognition

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Architectural limits on split genes

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A segment-based dynamic programming algorithm for predicting gene structure

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Predicting internal exons by oligonucleotide composition and discriminant analysis of spliceable open reading frames

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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A Tool for Analyzing and Annotating Genomic Sequences

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7 January 2021

Gene recognition via spliced sequence alignment.

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

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Las Vegas Algorithms for Gene Recognition: Suboptimal and Error-Tolerant Spliced Alignment

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DNA sequence analysis of 66 kb of the human MHC class II region encoding a cluster of genes for antigen processing

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7 January 2021

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Automated Gene Identification in Large-Scale Genomic Sequences1

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Regulation of Sex-Specific Selection of fruitless 5′ Splice Sites by transformerand transformer-2

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FANS-REF: a bibliography on statistics and functional analysis of nucleotide sequences

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GENMARK: Parallel gene recognition for both DNA strands

31 December 2024

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31 December 2024

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Finding genes in DNA using decision trees and dynamic programming

31 December 2024

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31 December 2024

Identifiers

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6 February 2018

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6 February 2018