Biochemical basis of DNA replication fidelity (Q40903454)

24 September 2017

title

Biochemical basis of DNA replication fidelity (English)

1 reference

24 September 2017

Goodman MF

1

1 reference

24 September 2017

Creighton S

series ordinal

2

1 reference

24 September 2017

Bloom LB

series ordinal

3

1 reference

24 September 2017

Petruska J

series ordinal

4

1 reference

24 September 2017

publication date

1 January 1993

1 reference

Critical Reviews in Biochemistry and Molecular Biology

24 September 2017

published in

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24 September 2017

volume

28

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24 September 2017

issue

2

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24 September 2017

page(s)

83-126

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publication type of scholarly work

24 September 2017

review article

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Genetical Implications of the Structure of Deoxyribonucleic Acid

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21 January 2018

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Identification of the epsilon-subunit of Escherichia coli DNA polymerase III holoenzyme as the dnaQ gene product: a fidelity subunit for DNA replication

21 January 2018

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Mismatch repair in Escherichia coli

21 January 2018

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21 January 2018

DNA mismatch correction

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Escherichia coli mutY gene encodes an adenine glycosylase active on G-A mispairs

21 January 2018

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8-oxoguanine (8-hydroxyguanine) DNA glycosylase and its substrate specificity

21 January 2018

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The GO system protects organisms from the mutagenic effect of the spontaneous lesion 8-hydroxyguanine (7,8-dihydro-8-oxoguanine)

21 January 2018

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Fidelity mechanisms in DNA replication

21 January 2018

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Studies on the biochemical basis of spontaneous mutation. II. The incorporation of a base and its analogue into DNA by wild-type, mutator and antimutator DNA polymerases

21 January 2018

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Kinetic mechanism of DNA polymerase I (Klenow).

21 January 2018

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Fidelity of replication of phage phi X174 DNA by DNA polymerase III holoenzyme: spontaneous mutation by misincorporation

21 January 2018

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Mechanisms of mutagenesis in the Escherichia coli mutator mutD5: role of DNA mismatch repair

21 January 2018

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Bacterial mutator genes and the control of spontaneous mutation

21 January 2018

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DNA polymerization in the absence of exonucleolytic proofreading: in vivo and in vitro studies

21 January 2018

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Structure and function of the bacteriophage T4 DNA polymerase holoenzyme

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409239309086792

On the specificity of DNA polymerase

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409239309086792

Antimutagenic DNA polymerases of bacteriophage T4.

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409239309086792

Comparative rates of spontaneous mutation

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409239309086792

Genetic control of mutation rates in bacteriophageT4.

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409239309086792

Comparison between DNA melting thermodynamics and DNA polymerase fidelity

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Extension of mismatched 3' termini of DNA is a major determinant of the infidelity of human immunodeficiency virus type 1 reverse transcriptase.

21 January 2018

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Kinetic mechanism whereby DNA polymerase I (Klenow) replicates DNA with high fidelity

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409239309086792

Comparison of nucleotide interactions in water, proteins, and vacuum: model for DNA polymerase fidelity

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409239309086792

Enzyme associations in T4 phage DNA precursor synthesis

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409239309086792

Structure of large fragment of Escherichia coli DNA polymerase I complexed with dTMP

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409239309086792

Genetic and crystallographic studies of the 3',5'-exonucleolytic site of DNA polymerase I.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

DNA substrate structural requirements for the exonuclease and polymerase activities of procaryotic and phage DNA polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Studies on the biochemical basis of spontaneous mutation. III. Rate model for DNA polymerase-effected nucleotide misincorporation

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Specificity and efficiency of editing of mismatches involved in the formation of base-substitution mutations by the 3'----5' exonuclease activity of phage T4 DNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

An induced-fit kinetic mechanism for DNA replication fidelity: direct measurement by single-turnover kinetics

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Direct electrophoretic detection of the allelic state of single DNA molecules in human sperm by using the polymerase chain reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Detection of ras point mutations by polymerase chain reaction using mutation-specific, inosine-containing oligonucleotide primers

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Detection of single DNA base differences by competitive oligonucleotide priming

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Analysis of any point mutation in DNA. The amplification refractory mutation system (ARMS)

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Allele-specific enzymatic amplification of beta-globin genomic DNA for diagnosis of sickle cell anemia

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Extension of base mispairs by Taq DNA polymerase: implications for single nucleotide discrimination in PCR

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Effects of primer-template mismatches on the polymerase chain reaction: human immunodeficiency virus type 1 model studies

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Stepwise mechanism of HIV reverse transcriptase: primer function of phosphorothioate oligodeoxynucleotide

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Analysis of the RNA- and DNA-dependent DNA polymerase activities of point mutants of HIV-1 reverse transcriptase lacking ribonuclease H activity

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Fidelity of the RNA-dependent DNA synthesis exhibited by the reverse transcriptases of human immunodeficiency virus types 1 and 2 and of murine leukemia virus: mispair extension frequencies

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Reverse transcriptase from human immunodeficiency virus: a single template-primer binding site serves two physically separable catalytic functions

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

The accuracy of reverse transcriptase from HIV-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Fidelity of human immunodeficiency virus type I reverse transcriptase in copying natural DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Fidelity of human immunodeficiency virus type I reverse transcriptase in copying natural RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Fidelity of two retroviral reverse transcriptases during DNA-dependent DNA synthesis in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Frameshift mutations and the genetic code. This paper is dedicated to Professor Theodosius Dobzhansky on the occasion of his 66th birthday

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Mutational specificity of a conditional Escherichia coli mutator, mutD5

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Demonstration of the production of frameshift and base-substitution mutations by quasipalindromic DNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Polymerase-specific differences in the DNA intermediates of frameshift mutagenesis. In vitro synthesis errors of Escherichia coli DNA polymerase I and its large fragment derivative

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Frameshift mutation: determinants of specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Fluorescent oligonucleotides and deoxynucleotide triphosphates: preparation and their interaction with the large (Klenow) fragment of Escherichia coli DNA polymerase I.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Effect of 3' flanking neighbors on kinetics of pairing of dCTP or dTTP opposite O6-methylguanine in a defined primed oligonucleotide when Escherichia coli DNA polymerase I is used

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Kinetics of extension of O6-methylguanine paired with cytosine or thymine in defined oligonucleotide sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

O6-methylguanine and A.C and G.T mismatches cause asymmetric structural defects in DNA that are affected by DNA sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Nonrandom substitution of 2-aminopurine for adenine during deoxyribonucleic acid synthesis in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Influence of local nucleotide sequence on substitution of 2-aminopurine for adenine during deoxyribonucleic acid synthesis in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

The specific mutagenic effect of base analogues on Phage T4

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Deoxyribonucleotide pools, base pairing, and sequence configuration affecting bromodeoxyuridine- and 2-aminopurine-induced mutagenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

2-Aminopurine-induced mutagenesis in T4 bacteriophage: a model relating mutation frequency to 2-aminopurine incorporation in DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

On the molecular basis of transition mutations: frequencies of forming 2-aminopurine.cytosine and adenine.cytosine base mispairs in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Kinetic measurement of 2-aminopurine X cytosine and 2-aminopurine X thymine base pairs as a test of DNA polymerase fidelity mechanisms

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Fidelity of DNA synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Fidelity of replication of bacteriophage X174 DNA in vitro and in Vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

The fidelity of base selection by the polymerase subunit of DNA polymerase III holoenzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Base pairing and mutagenesis: observation of a protonated base pair between 2-aminopurine and cytosine in an oligonucleotide by proton NMR

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Synthesis and properties of defined DNA oligomers containing base mispairs involving 2-aminopurine

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

DNA replication fidelity: kinetics and thermodynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Interaction of DNA with the Klenow fragment of DNA polymerase I studied by time-resolved fluorescence spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Bacteriophage PRD1 DNA polymerase: evolution of DNA polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

T5 DNA polymerase: structural--functional relationships to other DNA polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

A general structure for DNA-dependent DNA polymerases.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Eukaryotic DNA polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Synthesis and physicochemical properties of two analogs of poly(dA): poly(2-aminopurine-9-β-D-deoxyribonucleotide) and poly 2-amino-deoxyadenylic acid

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Complementary base pairing and the origin of substitution mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Structure of an adenine-cytosine base pair in DNA and its implications for mismatch repair

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Refined crystal structure of an octanucleotide duplex with G . T mismatched base-pairs

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Detection of a guanine X adenine base pair in a decadeoxyribonucleotide by proton magnetic resonance spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Molecular structure of the G.A base pair in DNA and its implications for the mechanism of transversion mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Crystal structure and stability of a DNA duplex containing A(anti).G(syn) base-pairs

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Characterization of the high pH wobble structure of the 2-aminopurine.cytosine mismatch by N-15 NMR spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Ionized and wobble base-pairing for bromouracil-guanine in equilibrium under physiological conditions. A nuclear magnetic resonance study on an oligonucleotide containing a bromouracil-guanine base-pair as a function of pH.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Enzymatic synthesis of deoxyribonucleic acid. X. Influence of bromouracil substitutions on replication

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

A fidelity assay using "dideoxy" DNA sequencing: a measurement of sequence dependence and frequency of forming 5-bromouracil X guanine base mispairs

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Effect of pH on the base-mispairing properties of 5-bromouracil during DNA synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

The barrier to recombination between Escherichia coli and Salmonella typhimurium is disrupted in mismatch-repair mutants

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Escherichia coli MutY protein has both N-glycosylase and apurinic/apyrimidinic endonuclease activities on A.C and A.G mispairs

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Evidence that MutY and MutM combine to prevent mutations by an oxidatively damaged form of guanine in DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

MutM, a protein that prevents G C→T A transversions, is formamidopyrimidine-DNA glycosylase

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

A Factor (or Mutator Gene) Influencing Mutation Rates in Escherichia Coli

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

A specific role of MutT protein: to prevent dG.dA mispairing in DNA replication

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

MutT protein specifically hydrolyses a potent mutagenic substrate for DNA synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Insertion of specific bases during DNA synthesis past the oxidation-damaged base 8-oxodG

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Inducible DNA repair systems

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Regulation and expression of the adaptive response to alkylating agents

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

SOS Repair Hypothesis: Phenomenology of an Inducible DNA Repair Which is Accompanied by Mutagenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

The SOS regulatory system of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Mutation induced by DNA damage: a many protein affair

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Mutagenic repair in Escherichia coli: products of the recA gene and of the umuD and umuC genes act at different steps in UV-induced mutagenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

SOS-dependent replication past a single trans-syn T-T cyclobutane dimer gives a different mutation spectrum and increased error rate compared with replication past this lesion in uninduced cells

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Mutation frequency and spectrum resulting from a single abasic site in a single-stranded vector

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Activity of the purified mutagenesis proteins UmuC, UmuD', and RecA in replicative bypass of an abasic DNA lesion by DNA polymerase III

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Sites of termination of in vitro DNA synthesis on ultraviolet- and N-acetylaminofluorene-treated phi X174 templates by prokaryotic and eukaryotic DNA polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Frequency and spectrum of mutations produced by a single cis-syn thymine-thymine cyclobutane dimer in a single-stranded vector

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

cis-syn thymine dimers are not absolute blocks to replication by DNA polymerase I of Escherichia coli in vitro.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

In vitro evidence that UV-induced frameshift and substitution mutations at T tracts are the result of misalignment-mediated replication past a specific thymine dimer

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Oxidative damage in DNA. Lack of mutagenicity by thymine glycol lesions

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Thymine glycols and urea residues in M13 DNA constitute replicative blocks in vitro.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

In vivo mutagenesis by O6-methylguanine built into a unique site in a viral genome

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

uvrA and recA mutations inhibit a site-specific transition produced by a single O6-methylguanine in gene G of bacteriophage phi X174.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

The in vivo mutagenic frequency and specificity of O6-methylguanine in phi X174 replicative form DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Mutagenic potential of O4-methylthymine in vivo determined by an enzymatic approach to site-specific mutagenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Mutagenic frequencies of site-specifically located O6-methylguanine in wild-type Escherichia coli and in a strain deficient in ada-methyltransferase

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Comparative efficiency of forming m4T.G versus m4T.A base pairs at a unique site by use of Escherichia coli DNA polymerase I (Klenow fragment) and Drosophila melanogaster polymerase alpha-primase complex

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Mutagenesis by apurinic/apyrimidinic sites

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Infidelity of DNA synthesis associated with bypass of apurinic sites

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

The 'A rule' of mutagen specificity: a consequence of DNA polymerase bypass of non-instructional lesions?

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Synthesis and biophysical studies of short oligodeoxynucleotides with novel modifications: a possible approach to the problem of mixed base oligodeoxynucleotide synthesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

RecA protein and SOS. Correlation of mutagenesis phenotype with binding of mutant RecA proteins to duplex DNA and LexA cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Base-base mismatches. Thermodynamics of double helix formation for dCA3XA3G + dCT3YT3G (X, Y = A,C,G,T).

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Thermodynamic comparison of the base pairs formed by the carcinogenic lesion O6-methylguanine with reference both to Watson-Crick pairs and to mismatched pairs

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Pre-steady-state kinetic analysis of processive DNA replication including complete characterization of an exonuclease-deficient mutant

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Minimal kinetic mechanism for misincorporation by DNA polymerase I (Klenow fragment)

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

Mechanism of mutagenesis by O6-methylguanine

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309086792

10.3109/10409239309086792

21 January 2018

Identifiers

DOI

1 reference

24 September 2017

1 reference