Comprehensive comparison of the interaction of the E2 master regulator with its cognate target DNA sites in 73 human papillomavirus types by sequence statistics (Q36457132)

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English	Comprehensive comparison of the interaction of the E2 master regulator with its cognate target DNA sites in 73 human papillomavirus types by sequence statistics	scientific article

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scholarly article

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Europe PubMed Central

PMC publication ID

14 August 2017

Comprehensive comparison of the interaction of the E2 master regulator with its cognate target DNA sites in 73 human papillomavirus types by sequence statistics (English)

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

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Mariano Dellarole

2

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Mariano Dellarole

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

author name string

Ignacio E Sánchez

1

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Kevin Gaston

3

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Europe PubMed Central

PMC publication ID

14 August 2017

Gonzalo de Prat Gay

4

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Europe PubMed Central

PMC publication ID

14 August 2017

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publication date

15 December 2007

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Europe PubMed Central

PMC publication ID

14 August 2017

number of pages

14

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inferred from page(s)

Nucleic Acids Research

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Europe PubMed Central

PMC publication ID

14 August 2017

36

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Europe PubMed Central

PMC publication ID

14 August 2017

3

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

756-769

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Case-control study of human papillomavirus and oropharyngeal cancer

1 reference

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Molecular dynamics of the DNA-binding domain of the papillomavirus E2 transcriptional regulator uncover differential properties for DNA target accommodation.

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Enrichment or depletion of a GO category within a class of genes: which test?

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Characterization of the nuclear localization signal of high risk HPV16 E2 protein

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30 September 2017

Human papillomavirus E2 protein associates with nuclear receptors to stimulate nuclear receptor- and E2-dependent transcriptional activations in human cervical carcinoma cells

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Epidemiological and functional implications of molecular variants of human papillomavirus.

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30 September 2017

Structural and thermodynamic basis for the enhanced transcriptional control by the human papillomavirus strain-16 E2 protein

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E2 proteins from high- and low-risk human papillomavirus types differ in their ability to bind p53 and induce apoptotic cell death

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Molecular biology of human papillomavirus infection and cervical cancer

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Different papillomaviruses have different repertoires of transcription factor binding sites: convergence and divergence in the upstream regulatory region

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PUBLIC HEALTH: High Hopes and Dilemmas for a Cervical Cancer Vaccine

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Conserved methylation patterns of human papillomavirus type 16 DNA in asymptomatic infection and cervical neoplasia

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The human papillomavirus-18 genome is efficiently targeted by cellular DNA methylation

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Molecular dynamics simulations of papilloma virus E2 DNA sequences: dynamical models for oligonucleotide structures in solution

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Comparison of the structure and DNA-binding properties of the E2 proteins from an oncogenic and a non-oncogenic human papillomavirus

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Methylation Patterns of Papillomavirus DNA, Its Influence on E2 Function, and Implications in Viral Infection

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30 September 2017

CpG methylation of human papillomavirus type 16 DNA in cervical cancer cell lines and in clinical specimens: genomic hypomethylation correlates with carcinogenic progression

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30 September 2017

Asymmetric recognition of nonconsensus AP-1 sites by Fos-Jun and Jun-Jun influences transcriptional cooperativity with NFAT1

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Epidemiologic classification of human papillomavirus types associated with cervical cancer

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Transcriptional activity among high and low risk human papillomavirus E2 proteins correlates with E2 DNA binding

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Plasticity in protein-DNA recognition: lac repressor interacts with its natural operator 01 through alternative conformations of its DNA-binding domain

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The papillomavirus E2 proteins: structure, function, and biology

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DNA bending by an adenine-thymine tract and its role in gene regulation

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Orientation of a novel DNA binding site affects human papillomavirus-mediated transcription and replication

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Asymmetric DNA binding by a homodimeric bHLH protein

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The structural basis of DNA target discrimination by papillomavirus E2 proteins

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A functional NF-kappaB binding site in the human papillomavirus type 16 long control region

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Structure of a HAP1-DNA complex reveals dramatically asymmetric DNA binding by a homodimeric protein

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Crystal structure of the E2 DNA-binding domain from human papillomavirus type 16: implications for its DNA binding-site selection mechanism

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Structural code for DNA recognition revealed in crystal structures of papillomavirus E2-DNA targets

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Human papillomavirus type 31b E1 and E2 transcript expression correlates with vegetative viral genome amplification

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Escherichia coli cAMP receptor protein-DNA complexes. 2. Structural asymmetry of DNA bending

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Differential requirements for conserved E2 binding sites in the life cycle of oncogenic human papillomavirus type 31

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Different mechanisms contribute to the E2-mediated transcriptional repression of human papillomavirus type 18 viral oncogenes

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Cell-type-specific separate regulation of the E6 and E7 promoters of human papillomavirus type 6a by the viral transcription factor E2

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A fluorescence anisotropy study of DNA binding by HPV-11 E2C protein: a hierarchy of E2-binding sites

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Human papillomavirus type 11 E2 proteins repress the homologous E6 promoter by interfering with the binding of host transcription factors to adjacent elements.

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Two E2 binding sites (E2BS) alone or one E2BS plus an A/T-rich region are minimal requirements for the replication of the human papillomavirus type 11 origin.

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Selection of DNA binding sites by regulatory proteins

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Indirect readout of DNA sequence by papillomavirus E2 proteins depends upon net cation uptake.

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21 September 2018

Structural and energetic origins of sequence-specific DNA bending: Monte Carlo simulations of papillomavirus E2-DNA binding sites.

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21 September 2018

Free energy contributions to direct readout of a DNA sequence

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Solution structure of the HPV-16 E2 DNA binding domain, a transcriptional regulator with a dimeric beta-barrel fold

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DNA binding and bending by the human papillomavirus type 16 E2 protein. Recognition of an extended binding site

1 reference

https://pubmed.ncbi.nlm.nih.gov/18084026

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the DNA-binding activity of the E1 and E2 proteins and the E1/E2 complex of human papillomavirus type 33

1 reference

https://pubmed.ncbi.nlm.nih.gov/18084026

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKM1104

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

ResearchGate publication ID

0 references

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