TFIIIA induced DNA bending: effect of low ionic strength electrophoresis buffer conditions (Q35912502)

11 August 2017

TFIIIA induced DNA bending: effect of low ionic strength electrophoresis buffer conditions (English)

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11 August 2017

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G P Schroth

1

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11 August 2017

J M Gottesfeld

series ordinal

2

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11 August 2017

E M Bradbury

series ordinal

3

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11 August 2017

language of work or name

English

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publication date

1 February 1991

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11 August 2017

Nucleic Acids Research

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11 August 2017

19

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11 August 2017

511-516

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11 August 2017

3

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A control region in the center of the 5S RNA gene directs specific initiation of transcription: II. The 3' border of the region

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

A specific transcription factor that can bind either the 5S RNA gene or 5S RNA

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

The locus of sequence-directed and protein-induced DNA bending

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Specific interaction of a purified transcription factor with an internal control region of 5S RNA genes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Structural analysis of a triple complex between the histone octamer, a Xenopus gene for 5S RNA and transcription factor IIIA.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Repetitive zinc-binding domains in the protein transcription factor IIIA from Xenopus oocytes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Plasmid permutation vectors to monitor DNA bending

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

The 5S gene internal control region is B-form both free in solution and in a complex with TFIIIA.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

DNA sequence-directed nucleosome reconstitution on 5S RNA genes of Xenopus laevis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Xenopus transcription factor IIIA binds primarily at junctions between double helical stems and internal loops in oocyte 5S RNA.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

An elongated model of theXenopus laevistranscription factor IIIA-5S ribosomal RNA complex derived from neutron scattering and hydrodynamic measurements

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

LexA repressor induces operator-dependent DNA bending.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Transcription by RNA polymerase III.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Bent DNA functions as a replication enhancer in Saccharomyces cerevisiae

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

The A+T-rich sequence of the simian virus 40 origin is essential for replication and is involved in bending of the viral DNA

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Electron microscopy reveals that transcription factor TFIIIA bends 5S DNA.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Mapping functional regions of transcription factor TFIIIA.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Transcription factor IIIA induced bending of the Xenopus somatic 5S gene promoter.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

The C-terminal domain of transcription factor IIIA interacts differently with different 5S RNA genes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

DNA conformation and protein binding

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Rotational orientation of upstream curved DNA affects promoter function in Bacillus subtilis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Three-dimensional solution structure of a single zinc finger DNA-binding domain

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Conformation states of Xenopus transcription factor IIIA.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Differential transcription of Xenopus oocyte and somatic-type 5 S genes in a Xenopus oocyte extract.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

S. cerevisiae TFIIIB is the transcription initiation factor proper of RNA polymerase III, while TFIIIA and TFIIIC are assembly factors

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Mode of interaction of the zinc finger protein TFIIIA with a 5S RNA gene of Xenopus

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Absence of substantial bending in Xenopus laevis transcription factor IIIA-DNA complexes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Zinc Finger Domains: Hypotheses and Current Knowledge

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Zinc fingers and other metal-binding domains. Elements for interactions between macromolecules

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Functional replacement of a protein-induced bend in a DNA recombination site

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333641

Association of a 5S gene transcription factor with 5S RNA and altered levels of the factor during cell differentiation

24 September 2018

1 reference

12 December 2020

Contact points between a positive transcription factor and the Xenopus 5S RNA gene

1 reference

12 December 2020

Domains of the positive transcription factor specific for the Xenopus 5S RNA gene

1 reference

12 December 2020

Physical properties and DNA-binding stoichiometry of a 5 S gene-specific transcription factor

1 reference

12 December 2020

Mapping of the sites of protection on a 5 S RNA gene by the Xenopus transcription factor IIIA. A model for the interaction

1 reference

12 December 2020

Phosphorus imaging of the 7-S ribonucleoprotein particle

1 reference

12 December 2020

Sequence-specific [1H]NMR resonance assignments and secondary structure identification for 1- and 2-zinc finger constructs from SW15. A hydrophobic core involving four invariant residues

1 reference

12 December 2020

A protein-protein interaction is essential for stable complex formation on a 5 S RNA gene

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/19.3.511

1 reference

release_fcizs5oubfflvozshecu5v2sde

11 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/fcizs5oubfflvozshecu5v2sde

24 November 2022

mapped directly with Wikidata item

1 reference

11 August 2017

1 reference