Mechanisms for ATP-dependent chromatin remodelling: farewell to the tuna-can octamer? (Q35804610)

10 August 2017

title

Mechanisms for ATP-dependent chromatin remodelling: farewell to the tuna-can octamer? (English)

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10 August 2017

Andrew Flaus

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Tom Owen-Hughes

object named as

Tom Owen-Hughes

series ordinal

2

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publication date

1 April 2004

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Current Opinion in Genetics & Development

10 August 2017

language of work or name

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10 August 2017

volume

14

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10 August 2017

issue

2

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10 August 2017

page(s)

165-173

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publication type of scholarly work

10 August 2017

review article

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A chromatin remodelling complex involved in transcription and DNA processing.

cites work

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2 April 2022

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Mutations in both the structured domain and N-terminus of histone H2B bypass the requirement for Swi-Snf in yeast

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Crystal structure and functional analysis of a nucleosome recognition module of the remodeling factor ISWI

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Nucleosomes unfold completely at a transcriptionally active promoter

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Sin mutations alter inherent nucleosome mobility

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Nucleosome gaping supports a functional structure for the 30nm chromatin fiber

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Involvement of actin-related proteins in ATP-dependent chromatin remodeling.

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hSWI/SNF-catalyzed nucleosome sliding does not occur solely via a twist-diffusion mechanism

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SWI/SNF-dependent chromatin remodeling of RNR3 requires TAF(II)s and the general transcription machinery

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https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Phosphorylation of linker histones regulates ATP-dependent chromatin remodeling enzymes

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2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

FACT facilitates transcription-dependent nucleosome alteration

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2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Distinct strategies to make nucleosomal DNA accessible

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2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Evidence for DNA translocation by the ISWI chromatin-remodeling enzyme

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2 April 2022

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Cell cycle-regulated histone acetylation required for expression of the yeast HO gene

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2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Linker Histone H1 Modulates Nucleosome Remodeling by Human SWI/SNF

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2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Function and selectivity of bromodomains in anchoring chromatin-modifying complexes to promoter nucleosomes.

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2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Mitotic inactivation of a human SWI/SNF chromatin remodeling complex

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2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Essential role for the SANT domain in the functioning of multiple chromatin remodeling enzymes

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2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

A Rad26-Def1 complex coordinates repair and RNA pol II proteolysis in response to DNA damage

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Mechanisms for ATP-dependent chromatin remodelling

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Mechanisms for nucleosome mobilization

2 references

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

2 April 2022

https://opencitations.net/index/coci/api/v1/citations/10.1002/BIP.10323

Isw1 chromatin remodeling ATPase coordinates transcription elongation and termination by RNA polymerase II.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

The mouse mammary tumour virus promoter positioned on a tetramer of histones H3 and H4 binds nuclear factor 1 and OTF1.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

The DNA chaperone HMGB1 facilitates ACF/CHRAC-dependent nucleosome sliding

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Nucleosome sliding induced by the xMi-2 complex does not occur exclusively via a simple twist-diffusion mechanism

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

High-affinity DNA binding by a Mot1p-TBP complex: implications for TAF-independent transcription

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Structural analysis of DNA replication fork reversal by RecG

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

The genome-wide localization of Rsc9, a component of the RSC chromatin-remodeling complex, changes in response to stress

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Models for chromatin remodeling: a critical comparison

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Structural analysis of the yeast SWI/SNF chromatin remodeling complex

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

The SWI/SNF complex creates loop domains in DNA and polynucleosome arrays and can disrupt DNA-histone contacts within these domains

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

ISWI Induces Nucleosome Sliding on Nicked DNA

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Chromatin remodeling activities act on UV-damaged nucleosomes and modulate DNA damage accessibility to photolyase.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

An ACF1-ISWI chromatin-remodeling complex is required for DNA replication through heterochromatin

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Methylation of histone H3 K4 mediates association of the Isw1p ATPase with chromatin

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

The nuclear actin-related proteins Arp7 and Arp9: a dimeric module that cooperates with architectural proteins for chromatin remodeling

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Chromatin remodeling by RSC involves ATP-dependent DNA translocation

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Conserved Histone Variant H2A.Z Protects Euchromatin from the Ectopic Spread of Silent Heterochromatin

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Chromatin remodeling in vivo: evidence for a nucleosome sliding mechanism

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Regulation of chromatin remodeling by inositol polyphosphates

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Histone H2A/H2B dimer exchange by ATP-dependent chromatin remodeling activities

2 references

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

2 April 2022

https://opencitations.net/index/coci/api/v1/citations/10.1016/S1097-2765(03)00499-4

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

The PHD finger of the chromatin-associated protein ING2 functions as a nuclear phosphoinositide receptor

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Genome-wide location and regulated recruitment of the RSC nucleosome-remodeling complex.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Nucleosome Repositioning via Loop Formation

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

The chromatin-remodeling complex WINAC targets a nuclear receptor to promoters and is impaired in Williams syndrome

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Dynamics of ATP-dependent chromatin assembly by ACF.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Modulation of ATP-dependent chromatin-remodeling complexes by inositol polyphosphates

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Crystal structures of nucleosome core particles in complex with minor groove DNA-binding ligands

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Promoter targeting of chromatin-modifying complexes.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Chromatin remodeling by ATP-dependent molecular machines.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Regulation of CSF1 promoter by the SWI/SNF-like BAF complex

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Targeting Activity Is Required for SWI/SNF Function In Vivo and Is Accomplished through Two Partially Redundant Activator-Interaction Domains

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Localized recruitment of a chromatin-remodeling activity by an activator in vivo drives transcriptional elongation

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

High-resolution mapping of changes in histone-DNA contacts of nucleosomes remodeled by ISW2

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

The Isw2 chromatin remodeling complex represses early meiotic genes upon recruitment by Ume6p

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Histone chaperone ASF1 cooperates with the Brahma chromatin-remodelling machinery

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Coordination of PIC Assembly and Chromatin Remodeling During Differentiation-Induced Gene Activation

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Crystal structure of the nucleosome core particle at 2.8 Å resolution

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Human SWI/SNF nucleosome remodeling activity is partially inhibited by linker histone H1

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

A model for dsDNA translocation revealed by a structural motif common to RecG and Mfd proteins

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Evidence that SNF2/SWI2 and SNF5 activate transcription in yeast by altering chromatin structure

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

ATP-dependent nucleosome remodeling

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

SWI/SNF unwraps, slides, and rewraps the nucleosome

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Rad54p is a chromatin remodeling enzyme required for heteroduplex DNA joint formation with chromatin

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Strand pairing by Rad54 and Rad51 is enhanced by chromatin

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Rad54 protein possesses chromatin-remodeling activity stimulated by the Rad51-ssDNA nucleoprotein filament

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Regulated displacement of TBP from the PHO8 promoter in vivo requires Cbf1 and the Isw1 chromatin remodeling complex

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Sequential recruitment of HAT and SWI/SNF components to condensed chromatin by VP16.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Structural analysis of the RSC chromatin-remodeling complex

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Dynamic Properties of Nucleosomes during Thermal and ATP-Driven Mobilization

2 references

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

2 April 2022

https://opencitations.net/index/coci/api/v1/citations/10.1128/MCB.23.21.7767-7779.2003

The ATRX syndrome protein forms a chromatin-remodeling complex with Daxx and localizes in promyelocytic leukemia nuclear bodies

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

The yeast Rad7/Rad16/Abf1 complex generates superhelical torsion in DNA that is required for nucleotide excision repair

2 references

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

2 April 2022

https://opencitations.net/index/coci/api/v1/citations/10.1016/J.DNAREP.2003.11.004

Nucleosome remodeling induced by RNA polymerase II: loss of the H2A/H2B dimer during transcription.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.GDE.2004.01.007

Identifiers

DOI

10.1016/J.GDE.2004.01.007

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10 August 2017

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