Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas (Q35630299)

9 August 2017

title

Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas (English)

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9 August 2017

main subject

Saccharomyces cerevisiae

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Hookeun Lee

12

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Alexey I. Nesvizhskii

object named as

Alexey I Nesvizhskii

series ordinal

4

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Ruedi Aebersold

series ordinal

14

object named as

Ruedi Aebersold

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9 August 2017

7

Jimmy Eng

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2

Eric W Deutsch

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5

James S Eddes

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13

Brian Raught

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9 August 2017

6

Parag Mallick

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9 August 2017

8

Frank Desiere

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1

Nichole L King

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3

Jeffrey A Ranish

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9

Mark Flory

1 reference

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Daniel B Martin

10

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Bong Kim

series ordinal

11

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9 August 2017

publication date

1 January 2006

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9 August 2017

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9 August 2017

volume

7

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9 August 2017

issue

11

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9 August 2017

page(s)

R106

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A uniform proteomics MS/MS analysis platform utilizing open XML file formats

9 August 2017

cites work

1 reference

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27 July 2018

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Proteome survey reveals modularity of the yeast cell machinery

27 July 2018

1 reference

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27 July 2018

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1 reference

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27 July 2018

1 reference

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27 July 2018

1 reference

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Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry

27 July 2018

1 reference

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27 July 2018

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27 July 2018

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An improved model for prediction of retention times of tryptic peptides in ion pair reversed-phase HPLC: its application to protein peptide mapping by off-line HPLC-MALDI MS.

27 July 2018

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27 July 2018

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27 July 2018

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Dynamic changes in transcription factor complexes during erythroid differentiation revealed by quantitative proteomics

27 July 2018

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27 July 2018

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Global analysis of protein expression in yeast

27 July 2018

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Global analysis of protein localization in budding yeast

27 July 2018

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Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS

27 July 2018

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Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome

27 July 2018

1 reference

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A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling

27 July 2018

1 reference

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Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

27 July 2018

1 reference

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Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

27 July 2018

1 reference

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Mechanisms underlying ubiquitination

27 July 2018

1 reference

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Integrated genomic and proteomic analyses of a systematically perturbed metabolic network

27 July 2018

1 reference

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Quantitative analysis of complex protein mixtures using isotope-coded affinity tags

27 July 2018

1 reference

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RNA polymerase II holoenzymes and subcomplexes.

27 July 2018

1 reference

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27 July 2018

1 reference

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Basic local alignment search tool

27 July 2018

1 reference

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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

27 July 2018

1 reference

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Comprehensive proteomics in yeast using chromatographic fractionation, gas phase fractionation, protein gel electrophoresis, and isoelectric focusing.

25 September 2018

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Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway

25 September 2018

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Quantitative mass spectrometry reveals a role for the GTPase Rho1p in actin organization on the peroxisome membrane

25 September 2018

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Characterizing complex peptide mixtures using a multi-dimensional liquid chromatography-mass spectrometry system: Saccharomyces cerevisiae as a model system

25 September 2018

1 reference

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Absolute quantification of specific proteins in complex mixtures using visible isotope-coded affinity tags

25 September 2018

1 reference

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The need for a public proteomics repository

25 September 2018

1 reference

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Gene expression analyzed by high-resolution state array analysis and quantitative proteomics: response of yeast to mating pheromone

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794584

The application of new software tools to quantitative protein profiling via isotope-coded affinity tag (ICAT) and tandem mass spectrometry: I. Statistically annotated datasets for peptide sequences and proteins identified via the application of ICAT

25 September 2018

1 reference

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25 September 2018

Subcellular proteomics

1 reference

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Large-scale analysis of the yeast proteome by multidimensional protein identification technology

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794584

The Transcriptome and Its Translation during Recovery from Cell Cycle Arrest inSaccharomyces cerevisiae

15 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794584

The study of macromolecular complexes by quantitative proteomics

15 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17101051

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GB-2006-7-11-R106

1 reference

Dimensions Publication ID

9 August 2017

0 references

1 reference

9 August 2017

1 reference